Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1404 ATGTCGTGGCAACAATATGTCGATGAGCACTTAATGTGCGATTTTGAAGGCAATCGTCTCACGGCTGCTGCAATTATTGGCCATGACGGCACCGTTTGGGCCCAGAGCTCCACATTCCCTCAGTTCAAGCCTGAAGAAATAAGTGCTATCATGAATGACTTTGCTGAACCTGGATCGCTTGCTCCGACTGGTTTGTACCTGGGTGGCACTAAGTATATGGTGATTCAAGGTGAACCCGGCGCTGTCATTCGTGGGAAGAAGGGCTCAGGTGGCATCACTATTAAGAAGACGAATCTGGCCTTAATAATTGTTTCTAGTTATTTGCGTGAATCATTGGAATTGTGGAGAATGTCTCAGAACAGTGGGTGCTGCAAGAGACTGGAGAGTAGCAGTTATATTTATCAACTACCTGCTTTTTTTATTCCCAAACCCTTGGACTGCGTCGTCTGTGTGAAGGAATAG 462 0.461 MSWQQYVDEHLMCDFEGNRLTAAAIIGHDGTVWAQSSTFPQFKPEEISAIMNDFAEPGSLAPTGLYLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTNLALIIVSSYLRESLELWRMSQNSGCCKRLESSSYIYQLPAFFIPKPLDCVVCVKE 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1404 153 PANTHER PROFILIN 1 104 IPR005455 GO:0003779
Bisa09g1404 153 ProSitePatterns Profilin signature. 1 8 IPR027310 GO:0003779
Bisa09g1404 153 Pfam Profilin 1 104 IPR005455 GO:0003779
Bisa09g1404 153 SUPERFAMILY Profilin (actin-binding protein) 2 104 IPR036140 -
Bisa09g1404 153 CDD PROF 2 103 IPR005455 GO:0003779
Bisa09g1404 153 Gene3D Dynein light chain 2a, cytoplasmic 1 129 - -
Bisa09g1404 153 SMART prof_2 1 132 IPR005455 GO:0003779
Bisa09g1404 153 FunFam Profilin 1 113 - -
Bisa09g1404 153 PRINTS Plant profilin signature 1 14 IPR005455 GO:0003779
Bisa09g1404 153 PRINTS Plant profilin signature 71 80 IPR005455 GO:0003779
Bisa09g1404 153 PRINTS Plant profilin signature 84 99 IPR005455 GO:0003779
Bisa09g1404 153 PRINTS Plant profilin signature 52 66 IPR005455 GO:0003779
Bisa09g1404 153 PRINTS Plant profilin signature 27 40 IPR005455 GO:0003779
Bisa09g1404 153 PRINTS Profilin signature 3 12 IPR005455 GO:0003779
Bisa09g1404 153 PRINTS Profilin signature 64 78 IPR005455 GO:0003779
Bisa09g1404 153 PRINTS Profilin signature 21 30 IPR005455 GO:0003779
Bisa09g1404 153 PRINTS Profilin signature 40 60 IPR005455 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1404 Bisa-ChrBisa09 20224482 20226901 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1404 1 103 Cytoskeleton Gene Families AT2G19760 75.728 2.43e-55 168