Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1399 ATGATTTCCCGGCAAAATGCCCAACCGGAGCAACAAACTTCAAAGTCTCAAATGTCGAAAACACCCCTCCACATCTTCACATTTCGTCTGCATTTCTTCCTATTGTTCAGTATCTCAGTGCCCTCTCTAGTAATTTCACAAACTACAAACTTCGAACGAACAATCCTACTCAACGTTAGGCGCCAACTAGGCGATCCACTGTCGCTTCGATCATGGAACTCATCATCCCCGCCGTGCGATTGGCCGGAGATACGCTGCGCCGGTGGTGCCATCACCGAGGTCCTCCTTCCGAACAAAAACATAACCAAGAAGCTACCGGCGACGATCTGCGACCTCAAGAATCTGACGAAGCTCGTTCTCTCAAACAATGACATCCCCGGAGAGTTCCCGACGTTCTTGTCCAACTGCTCCAGCCTCCAATTCCTTGACCTTTCTCAGAACTACTTCGTCGGTCCTATCCCCAACGACATCGACCGCCTCAAAACACTAAGGTACTTAGACCTCAGCTCCAACAATTTCTCCGGCGATGTCCCGGCGGCGATCGGGAGACTCTCGGAGTTGCAAACGCTGAACCTCTACAACAACGAGTTCAACGGCACGTTTCCCAAGGAAATCGGCAGATTATCTAATCTCGAAATCCTCGGTTTGGCCTATAACGACAAGTTTGTGCCCACGGCGATCCCACCGGAGTTCGGGAACTTGAGCAATTTGAGGTTCATGTGGATGACAAAGTCCAATTTAATCGGAGAGATCCCTGAAAGTTTCGCCAGTCTTACGAGTCTCGTGCAATTAGATTTGTCAAAGAACAGTTTGACAGGTAGCATCCCTAGTAGTTTATTCTTGCTCTCGAATTTGCAATTTCTGTATCTGTACCAAAATAAATTGTCCGGTGAGCTACCTAGTTCGATTCAGGCCTTGAGCTTGGTTCAAATTGATTTGGCAATGAACAACCTGACGGGTCTCATTCCTGAAGATTTTGGAAAGTTGGAGAATCTAACGGTACTGAATCTGTACGTGAATCAGTTATCCGGTCAGATTCCGAGGAGCTTAGGCCTAATCAAAACGCTTAAGTCCTTGAAGGTTTTCAGCAATAAGTTGAATGGAACTCTGCCTCCAGAACTGGGTCTATATTCCAAGCTTGAAGGGTTTGAAGTTGCAGACAATCAACTGAGTGGTGGGTTGCCTCAACATTTATGTGCCAATAATGCTTTGAAAGGTGTGATTGCTTTTTCTAACAATCTCAGTGGAAAATTGCCGGAATCGCTTGGAAATTGTACTACTCTGCTTACAGTCCAGCTTTTCAATAACAGTTTTTTTGGTGAGGTTCCTTTGAGTCTCTGGACTTCCAAGAATTTATCAACCTTGATGTTAAGCGGAAACGCGTTTTCTGGTCAACTTCCAAGTAAGTTAACTTGGAATATGTCGAGACTGGAGATCAGAGACAACAAGTTTTCAGGTGAAATATCTCTTGGAATTTTATCCGCTGTAAATTTAGCAGTTTTTGATGCAAGAAACAATCTGCTTTTGGGTGAAATTCCAAGGGAATTGACGGGTCTTTCTCGGCTTAATTCTCTCTTGCTCGACGGCAATCAACTTTCTGGTGCACTTCCATCGGAGATAGTCTCATGGCAATCCTTGAATACCTTAACTCTCTCAAGAAACAAACTTTCCGGGCAAATTCCGGCAGCTATGGGTCATCTCCCTAACCTTGTTTATTTGGACTTGTCAGAAAATGACATCTCCGGAGAAATCCCACCTCAACTTGGCAATTTGAGGCTTATTTTTCTCAACTTGTCGTCCAATAATCTTTCCGGGAACATCCCTGATGAGTTTAATAACCTCGCGTATGAAAACAGTTTCTTGGGCAATCCTAATCTGTGTGCTTATAATCCTAATCTCAACCTTTCAGCATGCTCGACCAAAACCCCACAATACCCAAACAAATCGTCTTCCAAACTCCTTGCCTTGATTCTTGTTCTCATCATCATTGCGTTGCTAGCCACTGCTTCACTGGCCTTTTATAAGTTCAAAGGCAGATGGGGCAAGAAAAGTCGTGGGCATAACCTTTCAACATGGAGGCTCACTTCATTCCAGAGGCTAGATCTCACGGAATGGAATCTCTTCTCAAATTTGATAGATGATAACCTCATTGGAAGTGGGGGCTTTGGGGAAGTTTACCGGATTGCCTCTAATCGTCCGGGTGAGTATGTTGCTGTGAAAAGGATTTGGGGTAGCAGAACCATGGATGACAGGCTAGAGAAAGAATTTATGGCTGAGGTTGAAATCCTTGGCGCGATTCGGCATTCCAATATAGTGAAGCTTCTATGTTGCATCTCAAGTGAAAACTCAAAACTCCTTGTTTATGAATACAAGGAAAACCAGAGCCTGGACAGATGGCTTCATGGGAAGAAAAAGGCATCGGCCAATTCACCCAACAATCATCTGGTCTTGAAATGGCCAACGAGATTGAAGATTGCCACTGGGGCTGCACAAGGTCTGTGTTACATGCACCACGATTGCTCCCCACCAGTCATCCACAGAGATGTGAAGTGTAGCAATATATTACTGGACTCCGAATTCAGGGCAAGTATTGCAGATTTTGGGCTAGCCAGGATGATGGCAAAGTCAGGGGAGCCACATAGCTTGTCTGCTATAGCAGGGTCTTTCGGCTACATACCCCCAGAATATGCCTATTCAACCAAGATAAACGAGAAAGTGGATGTATACAGTTTTGGGGTTGTGCTCCTGGAGCTTGTAACGGGAAAAGAACCTTATAGCGCAGACGAGCATATCAGCCTAGTGGATTGGGCATGGCAGTATTACAATGACGGGAAGTGCCTTACTGGTGCCTTGGATGAAGAAATCAAAGAAGCATGTCACGTGGAAGAGATGACAAGCATCTTTAAATTAGGCCTAATTTGCACGAGCACGTTACCCTCAAGTAGGCCTCCCATGAAAGAGATTCTGCAGGTGCTTCGTCAGTGTTGTTCTGCAGGATATTGCGGAGGTCAGAAAGTGGGAACCGAGTTCGACCTCACTCCCCTTCTTGGCGATGCTATGTACATTTCTAGCTATAAGGACAGTAAGAAGGCTATGGGCGAAAGTGATGATAGTTGCTTACAGAGCGTGTGA 3132 0.4534 MISRQNAQPEQQTSKSQMSKTPLHIFTFRLHFFLLFSISVPSLVISQTTNFERTILLNVRRQLGDPLSLRSWNSSSPPCDWPEIRCAGGAITEVLLPNKNITKKLPATICDLKNLTKLVLSNNDIPGEFPTFLSNCSSLQFLDLSQNYFVGPIPNDIDRLKTLRYLDLSSNNFSGDVPAAIGRLSELQTLNLYNNEFNGTFPKEIGRLSNLEILGLAYNDKFVPTAIPPEFGNLSNLRFMWMTKSNLIGEIPESFASLTSLVQLDLSKNSLTGSIPSSLFLLSNLQFLYLYQNKLSGELPSSIQALSLVQIDLAMNNLTGLIPEDFGKLENLTVLNLYVNQLSGQIPRSLGLIKTLKSLKVFSNKLNGTLPPELGLYSKLEGFEVADNQLSGGLPQHLCANNALKGVIAFSNNLSGKLPESLGNCTTLLTVQLFNNSFFGEVPLSLWTSKNLSTLMLSGNAFSGQLPSKLTWNMSRLEIRDNKFSGEISLGILSAVNLAVFDARNNLLLGEIPRELTGLSRLNSLLLDGNQLSGALPSEIVSWQSLNTLTLSRNKLSGQIPAAMGHLPNLVYLDLSENDISGEIPPQLGNLRLIFLNLSSNNLSGNIPDEFNNLAYENSFLGNPNLCAYNPNLNLSACSTKTPQYPNKSSSKLLALILVLIIIALLATASLAFYKFKGRWGKKSRGHNLSTWRLTSFQRLDLTEWNLFSNLIDDNLIGSGGFGEVYRIASNRPGEYVAVKRIWGSRTMDDRLEKEFMAEVEILGAIRHSNIVKLLCCISSENSKLLVYEYKENQSLDRWLHGKKKASANSPNNHLVLKWPTRLKIATGAAQGLCYMHHDCSPPVIHRDVKCSNILLDSEFRASIADFGLARMMAKSGEPHSLSAIAGSFGYIPPEYAYSTKINEKVDVYSFGVVLLELVTGKEPYSADEHISLVDWAWQYYNDGKCLTGALDEEIKEACHVEEMTSIFKLGLICTSTLPSSRPPMKEILQVLRQCCSAGYCGGQKVGTEFDLTPLLGDAMYISSYKDSKKAMGESDDSCLQSV 1043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1399 1043 Gene3D Ribonuclease Inhibitor 51 158 IPR032675 -
Bisa09g1399 1043 SMART serkin_6 711 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g1399 1043 ProSitePatterns Serine/Threonine protein kinases active-site signature. 844 856 IPR008271 GO:0004672|GO:0006468
Bisa09g1399 1043 Gene3D Ribonuclease Inhibitor 159 221 IPR032675 -
Bisa09g1399 1043 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 516 635 - -
Bisa09g1399 1043 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 202 299 - -
Bisa09g1399 1043 SUPERFAMILY Protein kinase-like (PK-like) 700 992 IPR011009 -
Bisa09g1399 1043 Gene3D Ribonuclease Inhibitor 222 306 IPR032675 -
Bisa09g1399 1043 Gene3D Phosphorylase Kinase; domain 1 693 790 - -
Bisa09g1399 1043 SUPERFAMILY RNI-like 308 614 - -
Bisa09g1399 1043 ProSiteProfiles Leucine-rich repeat profile. 260 282 IPR001611 GO:0005515
Bisa09g1399 1043 FunFam Highly similar to receptor-like protein kinase 306 471 - -
Bisa09g1399 1043 FunFam Receptor-like protein kinase HSL1 isoform A 49 199 - -
Bisa09g1399 1043 Pfam Protein kinase domain 714 990 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g1399 1043 Gene3D Transferase(Phosphotransferase) domain 1 792 1000 - -
Bisa09g1399 1043 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 226 987 - -
Bisa09g1399 1043 Pfam Leucine rich repeat 114 173 IPR001611 GO:0005515
Bisa09g1399 1043 Pfam Leucine rich repeat 542 580 IPR001611 GO:0005515
Bisa09g1399 1043 ProSiteProfiles Protein kinase domain profile. 711 1000 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g1399 1043 SMART LRR_typ_2 329 353 IPR003591 -
Bisa09g1399 1043 SMART LRR_typ_2 519 543 IPR003591 -
Bisa09g1399 1043 SMART LRR_typ_2 258 282 IPR003591 -
Bisa09g1399 1043 SMART LRR_typ_2 112 136 IPR003591 -
Bisa09g1399 1043 SMART LRR_typ_2 160 183 IPR003591 -
Bisa09g1399 1043 SMART LRR_typ_2 184 208 IPR003591 -
Bisa09g1399 1043 SMART LRR_typ_2 567 591 IPR003591 -
Bisa09g1399 1043 Pfam Leucine rich repeat N-terminal domain 52 86 IPR013210 -
Bisa09g1399 1043 SUPERFAMILY L domain-like 67 395 - -
Bisa09g1399 1043 FunFam Receptor-like protein kinase HSL1 691 790 - -
Bisa09g1399 1043 Gene3D Ribonuclease Inhibitor 397 645 IPR032675 -
Bisa09g1399 1043 Gene3D Ribonuclease Inhibitor 307 396 IPR032675 -
Bisa09g1399 1043 ProSitePatterns Protein kinases ATP-binding region signature. 717 740 IPR017441 GO:0005524
Bisa09g1399 1043 FunFam Kinase family with leucine-rich repeat domain-containing protein 791 1008 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1399 Bisa-ChrBisa09 20206916 20210137 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1399 39 1034 Receptor kinase-like Gene Family AT5G25930 55.355 0.0 1068
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa09g1399 Pkinase 3.2e-44 CL0016