Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1392 ATGCCTGAACTGCGTAGAGCACGCAGAAACCGGGCATTAGATAACTCAAACCCGAGTCCGATTACACAACCTGATAAGCCGACGGTAAGAGCTCGCCAGAGGAGAGGAACCGCAGCGCAGAATACAAGGAATAGGAAGCAGAAGAACGCTATCGCTGCTGATGAGACAAATAATATTGTGAAAAACGACGTCGGTGCCGTTCCTCTGATCAGGACATTGAAGGACGAGGAAGAAGACAAAGAAGAAGGACAAGCGCCGGACGCACCGATTAGGGTTTTGATACAGGAAGTCGGGGAAAAAGCCATGGATGAGTACGACAGTGGTGGCCGAAGCGCTGATAAGGCTCCGGAGGCCGAAGACGAGGGGAGCACAGCTCCCCTTCCTGAGAAGGTCCAGGTTGGTGGTTCCCCGCTGTACAGGATCGACAGAAAATTAGGGAAGGGAGGATTTGGACAAGTCTATGTTGGTAGGCGTGTAGGAGCTACAAATTGTAATGAACGAACTGGGCCTGGAGCTGTTGAAGTAGCCTTAAAATTCGAGCATAGAAGCAGCAAAGGGTGTAATTATGGTCCACCATATGAGTGGCAGGTTTACAATGCACTAGGTGGTAGTCATGGTGTTCCACGAGTTCATTTCAAGGGGCGTCAAGGCGACTACTATGTCATGGTTATGGATATGCTTGGCCCTAGTCTATGGGATGTGTGGAATAACAACTCGCATGCGATGTCTACAGAAATGGTGGCATGTATTGCAATTGAGGCTATCTCCATATTGGAGAAGATGCATTCTAGAGGATATGTGCATGGTGATGTCAAACCTGAGAACTTTCTGCTTGGCCCCCCTGTAACCTCTGATGAGAAAAAGCTGTTTCTTGTTGATCTTGGATTAGCAACCCGGTGGCGTGATAGTTCTACTGGCCTTCATGTTGAGTATGATCAACGCCCTGATGTATTTAGAGGGACAGTACGTTATGCTAGTGTGCATGCACATCTTGGAAGAACAGGCAGTAGGAGAGATGATCTGGAATCTCTTGCTTACACACTTACATTCCTTCTTCGTGGTCGTTTACCTTGGCAAGGATATCAGGGAGAAAATAAAGGATTTCTTGTTTGCAAGAAGAAGATGGCCACTTCCCCCGAAACTTTGTGTTGCTTTTGTCCTCAACCTTTCCGGCAGTTTGTTGAGTATGTGGTGAATTTGAAGTTTGATGAGGAACCTAATTATGCAAAGTACATATCCCTTTTTGATGGCATTGTTGGTCCAAATCCAGACATTAGGCCAATTAACACTGACGGTGCTCAGAAGCTTATATGTCAGGTTGGGCATAAGAGAGGGCGATTGACCATGGAAGAGGATGACGATGAACAGCCAAAGAAGAAGGTCAGAATGGGAATGCCAGCAACCCAGTGGATTAGTGTTTATAATGCTCGTCGACCAATGAAGCAAAGGTATCATTACAATGTTGCTGATGTGCGGCTATCTCAACACATTGAGAAAGGAAACGAAGATGGGTTATTTATCAGCAGTGTGGCTTCTTGTTCTAATCTTTGGGCACTTATTATGGATGCTGGCACTGGTTTCACTGCACAAGTTTATGAACTCTCACCTTACTTTCTTCACAAGGAATGGATTATGGAACAGTGGGAGAAGAATTACTACATTAGTGCCATAGCAGGAGCTAATAATGGTAGCTCATTGGTTGTAATGTCCAAAGGGACCCAGTATTTACAGCAATCATATAAAGTCAGTGATTCATTTCCATTCAAGTGGATCAATAAAAAATGGAGAGAAGGTTTTTATGTCACTGCCATGGCAACAGCTGGAAGTAGATGGGCAATCATTATGTCCCGTGGTGCTGGATTTTTAAACCAGGTTGTGGAACTTGATTTCCTATATCCCAGTGAAGGTATTCATTGTAGGTGGGATAGCGGGTACCGCATCACATCAACTGCTGCAACTTGGGACCAAGCTGCTTTTGTTCTTAGTGTGCCTAGAAGGAAACCTGCTGATGAAACTCAAGAGACACTCCGCACATCTGCTTTCCCTAGCACTCATGTTAAGGAAAAATGGGCCAAGAACTTGTATATTGCATCTATTTGTTATGGGAGAACAGTTTCATGA 2121 0.4521 MPELRRARRNRALDNSNPSPITQPDKPTVRARQRRGTAAQNTRNRKQKNAIAADETNNIVKNDVGAVPLIRTLKDEEEDKEEGQAPDAPIRVLIQEVGEKAMDEYDSGGRSADKAPEAEDEGSTAPLPEKVQVGGSPLYRIDRKLGKGGFGQVYVGRRVGATNCNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHAMSTEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPVTSDEKKLFLVDLGLATRWRDSSTGLHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLTFLLRGRLPWQGYQGENKGFLVCKKKMATSPETLCCFCPQPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPINTDGAQKLICQVGHKRGRLTMEEDDDEQPKKKVRMGMPATQWISVYNARRPMKQRYHYNVADVRLSQHIEKGNEDGLFISSVASCSNLWALIMDAGTGFTAQVYELSPYFLHKEWIMEQWEKNYYISAIAGANNGSSLVVMSKGTQYLQQSYKVSDSFPFKWINKKWREGFYVTAMATAGSRWAIIMSRGAGFLNQVVELDFLYPSEGIHCRWDSGYRITSTAATWDQAAFVLSVPRRKPADETQETLRTSAFPSTHVKEKWAKNLYIASICYGRTVS 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1392 706 MobiDBLite consensus disorder prediction 34 56 - -
Bisa09g1392 706 ProSiteProfiles Protein kinase domain profile. 139 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g1392 706 PANTHER CASEIN KINASE-RELATED 132 672 - -
Bisa09g1392 706 MobiDBLite consensus disorder prediction 103 124 - -
Bisa09g1392 706 SMART serkin_6 139 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g1392 706 FunFam casein kinase 1-like protein HD16 112 462 - -
Bisa09g1392 706 Pfam Protein kinase domain 139 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g1392 706 ProSitePatterns Serine/Threonine protein kinases active-site signature. 266 278 IPR008271 GO:0004672|GO:0006468
Bisa09g1392 706 SUPERFAMILY Protein kinase-like (PK-like) 139 421 IPR011009 -
Bisa09g1392 706 Gene3D Transferase(Phosphotransferase) domain 1 106 462 - -
Bisa09g1392 706 MobiDBLite consensus disorder prediction 103 133 - -
Bisa09g1392 706 MobiDBLite consensus disorder prediction 1 56 - -
Bisa09g1392 706 CDD STKc_CK1 139 415 - -
Bisa09g1392 706 ProSitePatterns Protein kinases ATP-binding region signature. 145 178 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1392 Bisa-ChrBisa09 20041931 20046731 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1392 234 415 MAP Kinase Kinase Kinase AT5G50180 26.630 8.97e-09 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Bisa09g1392 Pkinase 5.2e-15 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g1392 09 20041931 20046731 Bisa09g1392 09 20041931 20046731 ECH