Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1389 ATGCCTGAACTGCGTAGCAGAGCACGCAGAAACCGGGCATTAGACAACTCAAACCCGAGTCCGATTATACAACCCGATAACCTGACGGTAAGAACTCGCCAGAGGAGAAGAAGCGCCGCGCAGAATACGAGAAATCGGAAGCAGAAGAACGCGATCGCAGCTGATGAGACAAATAATATTGTGAAAAACGACGTCGGTGCCATTCCTCTGATCAGGACATTGAAGGACAAGGAAGAAGACAAAGAAGAAGGCCAAGCGCCAGACGCGCTGGTTAGGGTTTTGAGACACGAAGTTGGGGTAAAAACCATGGATGAGCACGACAGTGGTGGCCGAAGCGCTGATAAGGCTCCGGGGGCCGAAGACGAGGGGAGCACTGCTCCCCTTCCTGAGAAGGTCCAGGTTGGTGGATCCCCGCCATACAGAGTCGACAGAAAATTAGGGAAGGGAGGATTTGGACAAGTCTATGTTGGTAGGCGTGTAGGAGCCACAAATTGTAATGAACGAACTGGACCTGGAGCTGTTGAAGTAGCCTTAAAGTTCGAGCATAGAAGCAGCAAAGGATGTAATCATGGTCCACCATACGAGTGGCAGGTTTACAATGCATTAGGTGGTAGTCATGGTGTTCCACGAGTTCATTACAAGGGGCGGCAAGGCGACTACTATGTCATGGTCATGGATATGCTTGGCCCTAGTCTATGGGATGTGTGGAATAATAACTCGCATGCGATGTCTACAGAAATGGTGGCATGTATTGCAATTGAGGCTATCTCCATATTAGAGAAGATGCATTCTAGAGGATATGTGCATGGTGATGTCAAACCTGAGAACTTTCTGCTTGGCCCCCCTGGATCCCCTGATGAGAAAAAGCTGTTTCTTGTTGATCTTGGATTAGCAACCCGGTGGCGTGATAGTTCTACTGGCCTTCATGTTGAGTATGATCAACGCCCGGATGTATTTAGAGGGACAGTACGTTATGCTAGTGTGCATGCACATCTTGGAAGAACAGGTAGTAGGAGAGATGACCTGGAATCTCTTGCTTATACGCTTGTATTCCTTCTTCGTGGTCGTTTACCTTGGCAAGGATATCAGGGGGAAAATAAAGGATTTCTTGTTTGCAAGAAGAAGATGGCCACTTCCCCTGAAACATTGTGTTGCTTTTGTCCTCAACCTTTCCGGCAGTTTGTTGAGTATGTGGTGAATTTGAAGTTTGATGAGGAACCTAATTATGCAAAGTACATATCCCTTTTTGATGGCATTGTTGGTCCAAATCCAGACATCAGGCCAATAAACACTGATGGTGCTCAGAAGCTTATATGTCAAGTAGGGCATAAGAGAGGGCGATTGACCATGGAAGAGGACGACGATGAACAGCCAAAGAAGAAGGTCAGAATGGGAATGCCAGCAACCCAATGGATTAGTGTTTATAATGCTCGCCGACCAATGAAGCAAAGGTATCATTACAATGTTGCTGATGTGCGGCTGTCTCAACACATTGAGAAAGGAAATGAGGATGGGTTATTTATCAGCAGTGTGGCTTCTTGTTCTAACCTTTGGGCACTTATTATGGATGCTGGCACTGGTTTCACTGCACAAGTTTATGAACTCTCACCTTACTTTCTTCACAAGGAATGGATTATGGAACAGTGGGAGCAGAATTACTACATTAGTGCCATAGCAGGTGCTAATAATGGTAGCTCATTGGTTGTAATGTCCAAAGGGACCCAGTACTTACAGCAATCATATAAAGTCAGTGATTCATTTCCATTCAAGTGGATCAATAAAAAATGGAGAGAAGGTTTTTATGTCACTGCCATGGCCACAGCTGGAAGTAGATGGGCAATTGTTATGTCGCGGGGTGCAGGATTTTCAAACCAGGTTGTGGAACTTGATTTCCTCTATCCCAGTGAAGGTATTCATCGTAGGTGGGATAGTGGGTACCGCATCACATCAACTGCTGCAACTTGGGACCAAGCTGCTTTAGTTCTTAGTGTTCCTAGAAGAAAGCCAGCTGATGAAACTCAAGAGACACTCCGCACATCTGCTTTCCCTAGTACTCATGTTAAGGAAAAATGGGCCAAGAATTTGTACATTGCATCTATTTGTTATGGGAGAACAGTTTCATGA 2124 0.4576 MPELRSRARRNRALDNSNPSPIIQPDNLTVRTRQRRRSAAQNTRNRKQKNAIAADETNNIVKNDVGAIPLIRTLKDKEEDKEEGQAPDALVRVLRHEVGVKTMDEHDSGGRSADKAPGAEDEGSTAPLPEKVQVGGSPPYRVDRKLGKGGFGQVYVGRRVGATNCNERTGPGAVEVALKFEHRSSKGCNHGPPYEWQVYNALGGSHGVPRVHYKGRQGDYYVMVMDMLGPSLWDVWNNNSHAMSTEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPGSPDEKKLFLVDLGLATRWRDSSTGLHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLVFLLRGRLPWQGYQGENKGFLVCKKKMATSPETLCCFCPQPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPINTDGAQKLICQVGHKRGRLTMEEDDDEQPKKKVRMGMPATQWISVYNARRPMKQRYHYNVADVRLSQHIEKGNEDGLFISSVASCSNLWALIMDAGTGFTAQVYELSPYFLHKEWIMEQWEQNYYISAIAGANNGSSLVVMSKGTQYLQQSYKVSDSFPFKWINKKWREGFYVTAMATAGSRWAIVMSRGAGFSNQVVELDFLYPSEGIHRRWDSGYRITSTAATWDQAALVLSVPRRKPADETQETLRTSAFPSTHVKEKWAKNLYIASICYGRTVS 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1389 707 ProSitePatterns Protein kinases ATP-binding region signature. 146 179 IPR017441 GO:0005524
Bisa09g1389 707 MobiDBLite consensus disorder prediction 13 29 - -
Bisa09g1389 707 CDD STKc_CK1 140 416 - -
Bisa09g1389 707 FunFam casein kinase 1-like protein HD16 113 463 - -
Bisa09g1389 707 Pfam Protein kinase domain 140 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g1389 707 PANTHER CASEIN KINASE-RELATED 134 672 - -
Bisa09g1389 707 MobiDBLite consensus disorder prediction 101 143 - -
Bisa09g1389 707 SUPERFAMILY Protein kinase-like (PK-like) 139 422 IPR011009 -
Bisa09g1389 707 ProSitePatterns Serine/Threonine protein kinases active-site signature. 267 279 IPR008271 GO:0004672|GO:0006468
Bisa09g1389 707 MobiDBLite consensus disorder prediction 1 55 - -
Bisa09g1389 707 Gene3D Transferase(Phosphotransferase) domain 1 109 463 - -
Bisa09g1389 707 MobiDBLite consensus disorder prediction 101 118 - -
Bisa09g1389 707 ProSiteProfiles Protein kinase domain profile. 140 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g1389 707 SMART serkin_6 140 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1389 Bisa-ChrBisa09 19964815 19969635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1389 142 416 MAP Kinase Kinase Kinase AT5G50180 23.958 1.83e-08 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Bisa09g1389 Pkinase 3.2e-16 CL0016