Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1383 ATGTTGGATGAACTAGAGTTGGAAGGGATGATGGCGGTGAGCTCCGGGTGCAAAGAGGGGAGCAAGGCGGGAATGGACAACGGAAAGTACGTGCGGTACACGCCGGAGCAGGTGGAAGCACTGGAGAGGCTTTATACCGAATGCCCTAAGCCAAGTTCCATGCGCCGCCAGCAGCTCATCAGAGAGTGTCCCATTCTCTCCAATATCGAGCCCAAGCAGATCAAGGTTTGGTTTCAAAATCGAAGATGTAGAGAGAAGCAGCGGAAAGAATCGTCACGCCTGCAAGGTGTGAACAGGAAACTGACGGCGATGAATAAACTACTGATGGAGGAAAATGAGAGATTGCAGAAGCAAGTGTCGCAGTTGGTTTATGAGAACGGCTTTTTCCGCCAGCAGACACAAAATGCGACCCTTGCTACGACGGACACAAGTTGTGAGTCAGTGGTAACCAGCGGTCAGCACCATCTGACACCTCAGCATCCACCAAGAGATGCCAGCCCTGCTGGACTTTTGTCCATTGCAGAGGAGACCTTAGCAGAGTTTCTTTCGAAGGCCACTGGAACTGCTGTAGAGTGGGTCCAGATGCCTGGAATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCTATTTCTCATGATTGCCATGGAGTGGCAGCACGAGCCTGCGGCCTTGTGGGTCTTGAACCTACAAGGGTTGCTGAAATCCTCAAAGATAGGCCCTCATGGTATCGTGATTGCCGAACTTTGGATGTTCTGAATGTAATGCCCACTGGAAATGGGGGAACCATTGAACTGCTTTACATGCAGTTGTATGCGCCAACAACTTTGGCACCAGCTCGTGACATCTGGTTGCTGCGCTACACATCAGTTTTGGAGGATGGCAGTCTAGTGGTCTGTGAAAGATCACTTAACAACACTCAGAATGGACCTACAGTGCCGCCAGTGCAGCATTTTGTTAGAGCAGACATGCTGCCTAGCGGCTATCTCATTAGACCTTGTGAAGGAAGTGGATCCATTATTCATATTGTTGATCATATGGATTTAGAGCCTTGGAGTGTACCTGAAGTATTGCGCCCACTTTATGAGTCATCAACGCTCCATGCTCAAAAGACCACTATGGCGGCTTTACGTCATTTAAGGCAGATTTCTCAAGAAGTTTCTCAGCCAAATGTCTCAGGATGGGGAAGAAGGCCTGCAGCTTTACGTGCGCTCGGTCAGCGGTTGAACAAGGGATTCAATGAAGCTGTCAATGGGTTTGCAGATGATGGCTGGTCCATGTTAGAAAGTGATGGCATTGATGATGTAACTCTTCTTGTGAATTCATCTCGTAACAAGATGATGGCAGTAAATCTAGGTCATAACAATGGATTTCCTTCTATGAGCAGCTCCGTGCTGTGTGCTAAAGCATCAATGTTGCTACAGAATGTTCCCCCTGCAATTCTTCTTAGATTCTTGCGGGAGCACCGATCAGAGTGGGCAGATAGTAGTATTGATGCTTACTCAGCTGCTGCAATTAAAGCCGGTCCATGTAGCTTGCCAGGAGCCCGAGCAGGAGGGTTTGGGGGTCAGGTTATTCTCCCACTGGCTCACACAATTGAGCATGAAGAGTTCATGGAGGTCATTAAGCTTGAAAACATGGGTTACTACAGGGATGACATGACTATACCCAGTGATATTTTCCTCTTGCAACTCTGTAGCGGAGCAGATGAGCATGCAGTTGGTTCCTCCGCAGAACTCATTTTTGCTCCCATTGATGCATCTTTCTCTGATGATGCACCCATTTTACCTTCTGGTTTTCGCATTATACCGATTGATTCTAACATGGATGCTGTAAGTCCAAACCGTACACTTGATCTTGCAGCTGCTCTTGAAGTTAAAACCACAGCCAATAAAGCAGGCAGTGATAATAACGGTAATTTGGGGAACACAAAATCTGTGATGACGATAGCATTCCAGTTTGCATTTGAAGTCCACCTTCAGGATAATGTAGCTTCTATGGCCCGGACGTATATCCGCAGTATTATTGCATCTGTTCAGAGGGTTGCATTAGCACTCTCTCCTTTACATTTTGGTTCTCATAATGGTTTGCGCCCGCCACCTGGCACTCCTGAGGCACAAACACTTGCTCGGTGGATATGTCAAAGTTACAGATGCTATTTAGGGGTAGAACTGCTAAAATGTGAAGGCAGTGAATCCATTCTCAAATCCCTTTGGCATCACTCAGATGCGATCATGTGCTGCTCTTTAAAGGCATTGCCCGTTTTTACATTTGCAAATCAAGCTGGACTTGACATGCTTGAGACAACCTTGGTTGCTCTTCAAGACATCACTCTGGAAAAAATCTTTGACGACAATGGAAAGAAAACCCTGTACTCTGAGTTCCCCCATATAATGCAACAGGGTTTTATGTGTATGCAAGGTGGCATCTGTTTGTCGAGCATGGGGAGGCCAGTGTCCTATGAGAGAGCAGTGGCATGGAAAGTACTGAACGAAGAAGAAACTGCCCATTGTATCTGTTTCATGTTCATCAACTGGTCTTTTGTCTGA 2547 0.4707 MLDELELEGMMAVSSGCKEGSKAGMDNGKYVRYTPEQVEALERLYTECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKESSRLQGVNRKLTAMNKLLMEENERLQKQVSQLVYENGFFRQQTQNATLATTDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHDCHGVAARACGLVGLEPTRVAEILKDRPSWYRDCRTLDVLNVMPTGNGGTIELLYMQLYAPTTLAPARDIWLLRYTSVLEDGSLVVCERSLNNTQNGPTVPPVQHFVRADMLPSGYLIRPCEGSGSIIHIVDHMDLEPWSVPEVLRPLYESSTLHAQKTTMAALRHLRQISQEVSQPNVSGWGRRPAALRALGQRLNKGFNEAVNGFADDGWSMLESDGIDDVTLLVNSSRNKMMAVNLGHNNGFPSMSSSVLCAKASMLLQNVPPAILLRFLREHRSEWADSSIDAYSAAAIKAGPCSLPGARAGGFGGQVILPLAHTIEHEEFMEVIKLENMGYYRDDMTIPSDIFLLQLCSGADEHAVGSSAELIFAPIDASFSDDAPILPSGFRIIPIDSNMDAVSPNRTLDLAAALEVKTTANKAGSDNNGNLGNTKSVMTIAFQFAFEVHLQDNVASMARTYIRSIIASVQRVALALSPLHFGSHNGLRPPPGTPEAQTLARWICQSYRCYLGVELLKCEGSESILKSLWHHSDAIMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDNGKKTLYSEFPHIMQQGFMCMQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1383 848 Pfam START domain 173 381 IPR002913 GO:0008289
Bisa09g1383 848 FunFam Homeobox-leucine zipper protein REVOLUTA 29 84 - -
Bisa09g1383 848 Gene3D - 206 387 IPR023393 -
Bisa09g1383 848 SMART START_1 172 382 IPR002913 GO:0008289
Bisa09g1383 848 Pfam Homeodomain 29 87 IPR001356 GO:0003677
Bisa09g1383 848 SMART HOX_1 26 92 IPR001356 GO:0003677
Bisa09g1383 848 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 25 848 IPR044830 GO:0003700
Bisa09g1383 848 Coils Coil 98 125 - -
Bisa09g1383 848 CDD homeodomain 29 89 IPR001356 GO:0003677
Bisa09g1383 848 ProSiteProfiles START domain profile. 163 377 IPR002913 GO:0008289
Bisa09g1383 848 ProSiteProfiles 'Homeobox' domain profile. 24 88 IPR001356 GO:0003677
Bisa09g1383 848 CDD bZIP 81 120 - -
Bisa09g1383 848 SUPERFAMILY Bet v1-like 172 384 - -
Bisa09g1383 848 Gene3D - 20 95 - -
Bisa09g1383 848 CDD START_ArGLABRA2_like 167 382 - -
Bisa09g1383 848 Pfam MEKHLA domain 707 847 IPR013978 -
Bisa09g1383 848 SUPERFAMILY Homeodomain-like 28 90 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1383 Bisa-ChrBisa09 19891430 19897594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1383 25 848 Homeobox Transcription Factor Family AT4G32880 80.843 0.0 1398
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bisa09g1383 START 4.2e-51 CL0209
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g1383 09 19891430 19897594 Bisa09g1383 09 19891430 19897594 ECH