Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1361 ATGGAGAAGACCAATGCGAGATCAAGAAAGCCATCGGAGAACAATGACCCACGTGATATCGCCAGAGAACACGTGATAGACGGCAGCAAAAAACAAGACATCCAGAAGGTGTGGAAGCGTTTGCTAGGGTTCATCATGGTTCTTTCTTTCTTCTTCAATGTTGATCAGTCCCAAGAGCCTGAAATGTCTCCAAATATCCATCCAAGCAAAGGGGTTGTAATAGCAGTACTCACCATTGTGTTCACCATCTCATTTCTCTTGCTTGCCTATGTAAAATTCTGCAGAAGCAGACCTCTCGAGTTTCGAGACATAAACTTACAGGGACTAACTCCTTCAGGTTCCAGATATTCCGGAATAGACAAACAAGTAATAGAAACACTACCCTTTTTCAAGTTCTCCTCGCTCAAAGGATCAAAAGAAGGCCTAGAATGTGCTGTGTGTCTGTCCAAGTTCGAAGATTCTGAGGTTCTTAGGTTGCTTCCAAAGTGCAAGCATGGCTTCCACATGAACTGCATCGACAAGTGGCTCGAGAGACACTCTAGCTGCCCTCTCTGCAGGTACAAGGTTGACCCAAAGGACATCAAGACCTTCACTTCCTCAATCAGCTCGAGGTCCCTCCGTGTCCCTTCAAACTTAACGGAAGACCCCAACCTCGAAATCTCCGTCCAGAGAGACCAATCTCCTGAAGCCTCGTCGAGATTTAAATACTGGAAACTCGTACAGAAGCTCAATCACAAGATAGTCATATCTGATGTTGCCACAAGAAGCAGGTGGAGTGATCTCTGTTCTTCGGATTTACTGTCGTTGAACTCTGAGATGCTCAGTGTTATGTCAAGCACAAGATTCTCTTCTTCCAACGAGGAGGAAAACTCAATCACGCTGCTGAATGAGAAGAGATCCATGTCTGAGATTGCCAATGTTTCGAGGTTTGAAGAAATCAGAAAGGAGGAGGATGCAGGGGGTTCAAGTGGGAATAATGGGAAGGAAGAGAGACTGAGCAGGATTTGGTTGTCAATTATGGAGCGAACAGTTCAATGGTTTGCGAGACGAGAGAGAAGCTTCAGAGATTTGGAACACAGACCGATTACCTCAGACGTTTGA 1101 0.4541 MEKTNARSRKPSENNDPRDIAREHVIDGSKKQDIQKVWKRLLGFIMVLSFFFNVDQSQEPEMSPNIHPSKGVVIAVLTIVFTISFLLLAYVKFCRSRPLEFRDINLQGLTPSGSRYSGIDKQVIETLPFFKFSSLKGSKEGLECAVCLSKFEDSEVLRLLPKCKHGFHMNCIDKWLERHSSCPLCRYKVDPKDIKTFTSSISSRSLRVPSNLTEDPNLEISVQRDQSPEASSRFKYWKLVQKLNHKIVISDVATRSRWSDLCSSDLLSLNSEMLSVMSSTRFSSSNEEENSITLLNEKRSMSEIANVSRFEEIRKEEDAGGSSGNNGKEERLSRIWLSIMERTVQWFARRERSFRDLEHRPITSDV 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1361 366 ProSiteProfiles Zinc finger RING-type profile. 144 186 IPR001841 -
Bisa09g1361 366 Pfam Ring finger domain 143 186 IPR001841 -
Bisa09g1361 366 CDD RING-H2_EL5-like 143 186 - -
Bisa09g1361 366 FunFam RING-H2 finger protein ATL43 119 193 - -
Bisa09g1361 366 SMART ring_2 144 185 IPR001841 -
Bisa09g1361 366 SUPERFAMILY RING/U-box 123 192 - -
Bisa09g1361 366 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 118 195 IPR013083 -
Bisa09g1361 366 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 58 352 - -
Bisa09g1361 366 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1361 Bisa-ChrBisa09 19614674 19616885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1361 64 353 C3H Transcription Factor Family AT2G20030 41.341 6.42e-74 233