Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1322 ATGCATATATTTAAGTTCGGATTTATTGACACACCAAGATCAGGCTCTAGTTTTCATTCCATTTTTGTGAAACTCATTTTGTTAAATTCTGCTGTTGATCTCTTGCCAGAAATGGGGATAGCAGAAGCATGCTCTAAATTCATTGGAGACTTTCTACAAGCTTTCAGAAGCTCACAAGAAAGCTCAAAGCCTGACCCTGATCACAGCAATCATCCTCCCTGCGAGTCCCAGAATGTGCTCAAGCTTGATGACATGATGGTTAGTGCACTCATCACTGTCTTTGGCATGGAAAACAATGGAAGAATCAAGAAGGAAAAAGCTCGGCGAGTGGTTGAGAAGCTTGGTTTGCTTTACGGTTCTGAGGAGGAAGAGGAGGAGGAGAAGTCCTGTGGGTTTGAGCTTCCTGGCCATGGCTTGGAAGATGATGAAGTACCTGTAGAAGAGGTCCTTAATGGATTGGAAGACGTGTCAAAGCGCAGCGAGCTATTACGCGAAGCCTTCAAAATCTTCGATGAAGATGGGGATGGATACATAGATGCAATGGAGTTGAAGAGGGTTCTGGATTGCCTGGGTTTGGGCAAAGGTTGGGATATCAATACCATTGAGAAAATGGTGAAGGTTGTAGATTTGAACTTTGATGGCAAGGTTGATTTTGGTGAGTTTGAGTTGATGATGGGATAG 681 0.4361 MHIFKFGFIDTPRSGSSFHSIFVKLILLNSAVDLLPEMGIAEACSKFIGDFLQAFRSSQESSKPDPDHSNHPPCESQNVLKLDDMMVSALITVFGMENNGRIKKEKARRVVEKLGLLYGSEEEEEEEKSCGFELPGHGLEDDEVPVEEVLNGLEDVSKRSELLREAFKIFDEDGDGYIDAMELKRVLDCLGLGKGWDINTIEKMVKVVDLNFDGKVDFGEFELMMG 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1322 226 PANTHER CALCIUM BINDING PROTEIN 91 225 - -
Bisa09g1322 226 CDD EFh 163 221 IPR002048 GO:0005509
Bisa09g1322 226 ProSitePatterns EF-hand calcium-binding domain. 171 183 IPR018247 -
Bisa09g1322 226 Gene3D - 136 225 - -
Bisa09g1322 226 SMART efh_1 200 226 IPR002048 GO:0005509
Bisa09g1322 226 SMART efh_1 162 190 IPR002048 GO:0005509
Bisa09g1322 226 ProSiteProfiles EF-hand calcium-binding domain profile. 196 226 IPR002048 GO:0005509
Bisa09g1322 226 SUPERFAMILY EF-hand 93 225 IPR011992 -
Bisa09g1322 226 Pfam EF-hand domain pair 162 225 IPR002048 GO:0005509
Bisa09g1322 226 FunFam Calmodulin A 152 226 - -
Bisa09g1322 226 ProSiteProfiles EF-hand calcium-binding domain profile. 158 193 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1322 Bisa-ChrBisa09 19080413 19084003 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1322 163 225 EF-hand Containing Proteins AT5G44460 57.143 1.55e-16 72.8