Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bisa09g1320 | ATGCAATTGGCTCGCGTTGAAAAGTACACCTTTCTGAGGCAGCGGGTTGAGGCAAGGCTTGCTGCTTTCCTAATGGAAAAAAAGAACATAGACTTGCTGGAAAGCAAGCTATACTTCTCCTTGATAAATCTCCCAAAAGCAAAAGCTACCCTTACAACTGCAAGAACAGCTGCAAATTTTATTTATGTGCCCCCAGCTCAACAAGCTGATGCTCATTCTAAGCGATCACTTAGGTCATTCGAAATTGCCTTGCAAGATTACAAGGCACAATTGAAGGGGGACCCAATTGTGTATAGGCACCTCTCGTCCCTTTATGATACTCTTCTGAAGCAGAATCTTTGCAGATTAATTGAGCCATTCTCGAGGGTTGAGATTGCGTATATTGTTGAGCTAATTGAACTTCCCATTGATAATGTGGAGCAAAAATTGTCTCAAATGATTTTGGACGAGAAGTTTACTGGGACATTGGACCAAGGTGCTATATGCCTCGTCATATTTGATGATCCTAAGAGTGATGCCATCTATCCTGCTACCTTAGAAACCATTTCCAACACTGGTAAGGTTGTGGATAGTCTTTATGTTAGGTCTGCCAAGATAATGGCATGA | 606 | 0.4191 | MQLARVEKYTFLRQRVEARLAAFLMEKKNIDLLESKLYFSLINLPKAKATLTTARTAANFIYVPPAQQADAHSKRSLRSFEIALQDYKAQLKGDPIVYRHLSSLYDTLLKQNLCRLIEPFSRVEIAYIVELIELPIDNVEQKLSQMILDEKFTGTLDQGAICLVIFDDPKSDAIYPATLETISNTGKVVDSLYVRSAKIMA | 201 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bisa09g1320 | 201 | Pfam | PCI domain | 71 | 165 | IPR000717 | - | |
| Bisa09g1320 | 201 | SMART | motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 | 99 | 182 | IPR000717 | - | |
| Bisa09g1320 | 201 | Gene3D | - | 70 | 200 | - | - | |
| Bisa09g1320 | 201 | PANTHER | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2 | 29 | 69 | - | - | |
| Bisa09g1320 | 201 | Pfam | 26S proteasome subunit RPN6 C-terminal helix domain | 172 | 197 | IPR040780 | - | |
| Bisa09g1320 | 201 | Gene3D | - | 1 | 69 | - | - | |
| Bisa09g1320 | 201 | ProSiteProfiles | PCI domain profile. | 1 | 170 | IPR000717 | - | |
| Bisa09g1320 | 201 | SUPERFAMILY | "Winged helix" DNA-binding domain | 93 | 175 | IPR036390 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bisa09g1320 | Bisa-ChrBisa09 | 19055001 | 19055929 | Wgd |