Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1310 ATGACTCATCAAAGAGCATACTATTACCTTATAGTATTCTTCACGCTGGCCATTCGTTCTGTGCCATCGTTAGGTGACACAGACCCTGAAATTCTGGTAAGGTTCAAGAGCTTCTTGTTCAATGCTGATGCTCTAAACAACTGGGGGAACGAGTCAATCGGTCTGTGCAGCTGGACTGGGTTATTATGCACCAACCAAACATTTTACGGCTTGAAACTAGAGAACATGGGAATTAGTGGTATTATTGACGTAGACACCCTCTTGGAGCTGTCGAATTTGAGCAGTTTCAGTGTCATTAACAACAGCTTTGAGGGTCCAATTCCTGAATTCCGAAAGCTTGTGAGGTTAAAGGGATTGTTTTTGTCCAATAACAAGTTCTCTGGTGAAATTCCGGATGAAGCTTTGGAGGGCATGAAACGCTTGAAGAGAGTATTCTTGGCAGAAAATGGATTCACAGGTCACATTCCTATGTCCCTTGCTAGATTGCCTGGAGTCTTGGATTTGGACATACATGGAAATAGCTTTGAAGGCAACATCCCAGAATTTAGCCAAAACAACTTCAGGGTGTTTAATCTATCCAACAACCAACTGGAGGGTCCAATACCAGAAAGCTTAAGCAATTATAATCTCAGTTCATATGCTGGCAACAAAGGCCTTTGTGGACATCCTTTAATCGCTTGCAGAAGCTTCTCCTCAGATGACAGACCCACCAATTCACATGAAGGAAAAGGAAAGAAGCATTCTTTACTTATTGCTGCTGTTGTTGTGGGGGCTGTTGTTGCCTTAGCTTCAATGGTGGCACTCCTTTTCATCTGTGGCCGGCGGAGAACATCACAGAACAATGAAGCCTCAGGGGAGACTCAATCTGTTGATATGACCTCTGATGGCTTGAAGAAGGGTGAGAATGCAGAATTGAACTTCGTTAGGAAAGACACAGAGGAATTTGGTATGCAAGACCTACTCAGGGCCTCAGCTGAGGTTCTGGGAAGTGGTAGATTCGGATCCACATACAAGGCAGTTGTTCTAAATCGGCATGCTGTGGTGGTGAAGAGATTTACGCACATGAACAATGTGGGGAAGGAAGAGTTTTCAGAGCACATGGAAAGGCTTGGGAGGTTGACACATCCTAATTTACTCCCTCTTGTTGCATTCTGCTACAGAGAAGAAGAGAAGCTTCTGGTTTATGACTTAGTTGAAAATGGCAGCTTGGCCAGTCATCTACATGGTAGAGTTGATTCTAATCTGGACTGGCCAACTCGATTGAACATAATAAAAGGAGTAGCGAGGGGGTTAGCATACCTGTACAAAGAGTTTCCAGGGCAGAACCTTCCACACGGCCATCTGAAATCCTCGAATATTCTACTAGACCACTCATTCGAACCGCATTTATCAGAATACGGACTTACTCCATTGATAAACCCTACCCACGCTCAACAGTTCATGGCAGCCTACAAATCCCCAGAAGTGAACCAGCAAGAGCGACCGACCCATAAGACAGACGTGTGGAGCTTGGGGATACTGATTCTCGAACTGCTGACAGGGAAACACCCAGGAAATTATCTGAGACGGAGAAAAGGGAGCAATGGGAACGGAGATTTGGGTACGTGGGTGAGATGGGTGGTGAGGGAGGAGTGGACGGGGGAGGTTCTGGACAAGGAGATGATGAGGGAGAGGCATGGCGAGGGAGAGATGCTGAAGCTGTTGAAGATTGGGATGTGTTGCTGCGAATGGAGCGTGCAGAGTCGGTGGGATTGGACAGAGGCGGTGGCGAAGATTGAAGAGGTGAAGGAGAGGGACAGCGAAGATGATGAATACTCTTCGTATGTGAGTGAGGGAAATTTGTACTCACGCCCATTGACTGAAGACGAGCTTTCTCCGTCTCTGAGTCATGCCCAGTAA 1899 0.4629 MTHQRAYYYLIVFFTLAIRSVPSLGDTDPEILVRFKSFLFNADALNNWGNESIGLCSWTGLLCTNQTFYGLKLENMGISGIIDVDTLLELSNLSSFSVINNSFEGPIPEFRKLVRLKGLFLSNNKFSGEIPDEALEGMKRLKRVFLAENGFTGHIPMSLARLPGVLDLDIHGNSFEGNIPEFSQNNFRVFNLSNNQLEGPIPESLSNYNLSSYAGNKGLCGHPLIACRSFSSDDRPTNSHEGKGKKHSLLIAAVVVGAVVALASMVALLFICGRRRTSQNNEASGETQSVDMTSDGLKKGENAELNFVRKDTEEFGMQDLLRASAEVLGSGRFGSTYKAVVLNRHAVVVKRFTHMNNVGKEEFSEHMERLGRLTHPNLLPLVAFCYREEEKLLVYDLVENGSLASHLHGRVDSNLDWPTRLNIIKGVARGLAYLYKEFPGQNLPHGHLKSSNILLDHSFEPHLSEYGLTPLINPTHAQQFMAAYKSPEVNQQERPTHKTDVWSLGILILELLTGKHPGNYLRRRKGSNGNGDLGTWVRWVVREEWTGEVLDKEMMRERHGEGEMLKLLKIGMCCCEWSVQSRWDWTEAVAKIEEVKERDSEDDEYSSYVSEGNLYSRPLTEDELSPSLSHAQ 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1310 632 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 84 179 - -
Bisa09g1310 632 ProSitePatterns Protein kinases ATP-binding region signature. 328 350 IPR017441 GO:0005524
Bisa09g1310 632 MobiDBLite consensus disorder prediction 596 632 - -
Bisa09g1310 632 FunFam Pollen receptor-like kinase 1 398 606 - -
Bisa09g1310 632 Pfam Leucine rich repeat N-terminal domain 27 63 IPR013210 -
Bisa09g1310 632 SUPERFAMILY L domain-like 39 211 - -
Bisa09g1310 632 SUPERFAMILY Protein kinase-like (PK-like) 326 594 IPR011009 -
Bisa09g1310 632 Gene3D Transferase(Phosphotransferase) domain 1 398 614 - -
Bisa09g1310 632 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 13 601 IPR046959 -
Bisa09g1310 632 Pfam Protein tyrosine and serine/threonine kinase 326 519 IPR001245 GO:0004672|GO:0006468
Bisa09g1310 632 ProSiteProfiles Protein kinase domain profile. 322 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g1310 632 Gene3D Ribonuclease Inhibitor 25 184 IPR032675 -
Bisa09g1310 632 Gene3D Ribonuclease Inhibitor 185 228 IPR032675 -
Bisa09g1310 632 Gene3D Phosphorylase Kinase; domain 1 287 397 - -
Bisa09g1310 632 MobiDBLite consensus disorder prediction 607 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1310 Bisa-ChrBisa09 18851878 18854002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1310 8 622 Receptor kinase-like Gene Family AT4G31250 44.559 0.0 538
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bisa09g1310 PK_Tyr_Ser-Thr 5.3e-30 CL0016