Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1305 ATGCAGAATACATGTAGTTTGGTTACAGGTAAACAGAGTATGTTCAAGTTAGTTCCTACCCATATTGTTAAGAGTTTAAGATTGGGAGGCCGTTTTGGTGGTTTCTTTTTCCTAAGCAAGTCAAATCCATATCCTCCATTTAAGTCTGACCAAAAATTCAATCTTCTTCCACAGGAAAGACCAGTCTCTCTCATTCAGTTCTATGTGAAGTTTGAAACTTTGGTTGATCAGAGAAGAAGATGGTCTTCTCTTTCCGTTTCTTCATTGTCATATGACTCGAGCTTCACAAAAATGGAGCTAAAAAATGAGAAGCTAGTCAGGTTTTACAACGATGGAAAGCAGAATCTGGAGCCAGTGTCAGTGTATAAGATACAAACAGGCATAAACCCAGAAGGCAAAATAGCAAGTGGTGACACTGATAAGAACAGGAGAATTAATCTGAAAATTCCGTCCCTTGGAAAGTTTAAGGTTTTCCCAGAAAAGCATGAGCCATGGAAGAGGAGAATTCTGGATCCTGGAAGTGATGTGTTTCTGCAATGGAACAGGGTTTTCCTGTGTTCTTGCATACTGGCCTTGTTTGTTGATCCACTGTTTTTGTACTTGCCCTCAGTGGCAAATGATGGGAATTCATCATCGTGTATGGCTATTGATTTGAACATAGGAATTGCTTTGACATGTTTCAGGACATTTGCTGATGTTTTCTATCTGATGAACATGGTCATAAAGTTCAGGACAGCCTATGTATCGCCAAGTTCTAGGGTTTTTGGAAGAGGTGAGCTAGTTATGAACCCGAGGTTGATCGCGAGGTGGTATTTGAGATCAGAATTTTTCATAGACCTTGGAGCTACATTGCCTCTTCCACAGATTGTGATTTGGTTTATAATGCCAGCAATCAGAAGCTCCCATGCTGATCACACCAACAATGCACTTGTACTCATTGTTCTGCTTCAGTATATCCCTAGATTGTATCTCATTTTCCCATTGAGTTCTCAGATGATCAAAGCCACTGGTTTAGTCACAAAGACAGCTTGGGCTGGAGCTGCTTATAATCTTTTGCTTTACATGTTGGCTAGTCATGTGTTGGGGGCATCATGGTACTTGTTGTCAATTGAAAGGCATGCCACATGTTGGAAATCTGAATGCAAAAATGAAAGCTTTCCCACAAAATGTGTTCTTCAGTACTTAGATTGCAGTACTTTGAACAATGAAGATCGCAGAAAGTGGGCAAACACTACTTCTCTGTTTAATAACTGTAATCCCCAAAAAAACATCAGTTTCAAGTATGGCATTTTTGGAGCTGCAGTTGAAAACAACGTTGTTTCCTCTCAGTTTCTGGAGAAGTATCTCTTTTGTCTATGGTGGGGCTTGCAGAACTTGAGTTCATATGGCCAGAATTTGACCACAAGCACATTCATTTGGGAAACTACATTTGCCATACTCATAGCAATCTTGGGTCTAGTTTTGTTTGCACACTTAATTGGTAACATGCAGACCTATCTGCAATCTATTACTGTGAGGCTTGAGGAGTGGAGGCTCAAGAGACGAGACACCGAAGAGTGGATGAAACACCGCCAACTCCCCCAGAATTTGAGGGAGCGTGTTCGAAGATTCGTTCAGTACAAGTGGCTTGCAAATAGAGGTGTTGACGAAGAATCTATCATACGAGGCCTCCCTAAAGACCTACGTAGAGATATTCAACGTCACCTTTGTTTGGACATCGTCCGACGAGTCCCCTTCTTCTCACAAATGGATGATCAACTTCTTGATGCAATATGTGAGAGATTGGTGTCATCCTTGATTACTCAAGGCACGTGCATCGTTCGGGAAGGCGATCCGGTGACAGAGATGCTTTTTATCATAAGAGGAAGACTTGAGAGCTCAACCACAAATGGAGGCAGAACAGGTTTCTTCAACTCCATTACACTGAGACCAGGTGATTTCTGTGGAGAAGAGCTGCTAGCATGGGCATTGCTTCCAAAATCCACTCTCAACTTGCCTTCTTCTACAAGAACAGTGAAAGCCCTACTGGAAGTGGAAGCCTTTGCACTGAGAGCAGAAGAGCTTAAATTCGTGGCAAATCAGTTCCGGCGTCTTCACAGCAAGAAGTTGCAGCACACGTTCCGGTTCTACTCGTACCATTGGAGGACATGGGCAGCTTGCTTCATTCAGGCTGGTTGGAGAAGGTACAAGAAGAGGATACTTGCAAAGAGACTTAGTTTGAGGGAATGCCAGTCATTTAGTGATGATGAACACACCAGTGAGAAAGAGCATAGTGCTGTGAATTCATGTACTAATACTTTACTGGGTGTCACTATATTGGCCTCAAGATTTGCTGCAAACACAAGAAGAGGAGCTCACAGGATTAAGGATGTTGAGATGCCTAAGCTGCAGAAGCCTGAAGAGCCAGACTTCTCAGTGGAGGCAGAAGATGACTAG 2436 0.4257 MQNTCSLVTGKQSMFKLVPTHIVKSLRLGGRFGGFFFLSKSNPYPPFKSDQKFNLLPQERPVSLIQFYVKFETLVDQRRRWSSLSVSSLSYDSSFTKMELKNEKLVRFYNDGKQNLEPVSVYKIQTGINPEGKIASGDTDKNRRINLKIPSLGKFKVFPEKHEPWKRRILDPGSDVFLQWNRVFLCSCILALFVDPLFLYLPSVANDGNSSSCMAIDLNIGIALTCFRTFADVFYLMNMVIKFRTAYVSPSSRVFGRGELVMNPRLIARWYLRSEFFIDLGATLPLPQIVIWFIMPAIRSSHADHTNNALVLIVLLQYIPRLYLIFPLSSQMIKATGLVTKTAWAGAAYNLLLYMLASHVLGASWYLLSIERHATCWKSECKNESFPTKCVLQYLDCSTLNNEDRRKWANTTSLFNNCNPQKNISFKYGIFGAAVENNVVSSQFLEKYLFCLWWGLQNLSSYGQNLTTSTFIWETTFAILIAILGLVLFAHLIGNMQTYLQSITVRLEEWRLKRRDTEEWMKHRQLPQNLRERVRRFVQYKWLANRGVDEESIIRGLPKDLRRDIQRHLCLDIVRRVPFFSQMDDQLLDAICERLVSSLITQGTCIVREGDPVTEMLFIIRGRLESSTTNGGRTGFFNSITLRPGDFCGEELLAWALLPKSTLNLPSSTRTVKALLEVEAFALRAEELKFVANQFRRLHSKKLQHTFRFYSYHWRTWAACFIQAGWRRYKKRILAKRLSLRECQSFSDDEHTSEKEHSAVNSCTNTLLGVTILASRFAANTRRGAHRIKDVEMPKLQKPEEPDFSVEAEDD 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1305 811 Gene3D - 209 505 - -
Bisa09g1305 811 Pfam Ion transport protein 180 506 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bisa09g1305 811 Pfam Cyclic nucleotide-binding domain 602 689 IPR000595 -
Bisa09g1305 811 MobiDBLite consensus disorder prediction 789 803 - -
Bisa09g1305 811 SUPERFAMILY Voltage-gated potassium channels 173 501 - -
Bisa09g1305 811 SUPERFAMILY cAMP-binding domain-like 509 701 IPR018490 -
Bisa09g1305 811 SMART cnmp_10 579 710 IPR000595 -
Bisa09g1305 811 FunFam Cyclic nucleotide-gated ion channel 1 506 570 - -
Bisa09g1305 811 ProSiteProfiles cAMP/cGMP binding motif profile. 579 662 IPR000595 -
Bisa09g1305 811 CDD CAP_ED 579 710 IPR000595 -
Bisa09g1305 811 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 160 804 - -
Bisa09g1305 811 Gene3D Jelly Rolls 577 697 IPR014710 -
Bisa09g1305 811 MobiDBLite consensus disorder prediction 789 811 - -
Bisa09g1305 811 FunFam Cyclic nucleotide-gated ion channel 1 577 695 - -
Bisa09g1305 811 Gene3D Helix hairpin bin 507 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1305 Bisa-ChrBisa09 18788073 18797230 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1305 107 807 Ion Channels AT2G24610 69.487 0.0 1018