Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1301 ATGGCGGTGGAGCTCATGGGGTTCCCAAAGATGAACGAGCAGAAGGCAATACAGGAGGCCGCATCGGAGGGATTGAAGGGCATGGAGCACATGATCCGTATCCTCTCGCAACAACCTGCACACGAAGATTACACTGACCTCACCGATGTAACCGTTTCTAAGTTCAAAAGAGTCATCTCCCTCCTGAACCGGACCGGCCACGCCCGGTTCAGGCGGGCACCTATTCCTTCATGTCCTTCTACCCCTACCTTGCCGCCGCCTCCGTCATCCGCAACTGCAGCCCCCTCCGTCTCGATTTCTCACGCACAAACTTTGAATCTGACTCCATCTCCGGCTCCAATCGTAAATCCGGTGACCGCGCATCACGCGCCTTCCAGTTTCGTTTCGGCTCAGGCGCCGCAGAGTTTAACTCTCGATTTTACAAAACCTAGCATTTTAACCTCCGGCTCCAAATCCCTAGAACTGGAGTTCTCGAAGGAAACCTTCAGCGTGTCCTCGAACTCGTCGTTTATGTCGTCCGCCATCACCGGCGACGGAAGCGTTTCGAACGGAAAACAAGGATCGTCGATCTTCTTGACTCCGGCTGCGCCGACTGTCTCCGGCGGAAAGCCACCTCTGTCAACGGGACCGGTCAAGAAAAGATGCCATGACCACCGGGACCACTCGGACGACGCCTCCGGCTCCAGCAAGTGCCACTGCGTCAAGAGAAGGAAGAATCGGGTGAAGAGGACTATAAGGGTGCCGGCGGTGAGTTCGAAGGTAGCGGATATTCCGGCGGACGAGTACTCGTGGAGGAAGTACGGGCAGAAGCCGATCAAGGGGTCGCCGTATCCACGGGGGTATTACAAGTGCAGTACAGTGAGGGGGTGTCCAGCGAGGAAACACGTGGAGAGGGCGACGGATGATCCGACGATGCTGATCGTGACGTATGAGGGAGAGCACCGACACTCGATGCAGGAGAACGTAGCCGGGGGCGTGGGATTGGTGTTCGAGTCAACGGGGACTTTGTAA 1011 0.5668 MAVELMGFPKMNEQKAIQEAASEGLKGMEHMIRILSQQPAHEDYTDLTDVTVSKFKRVISLLNRTGHARFRRAPIPSCPSTPTLPPPPSSATAAPSVSISHAQTLNLTPSPAPIVNPVTAHHAPSSFVSAQAPQSLTLDFTKPSILTSGSKSLELEFSKETFSVSSNSSFMSSAITGDGSVSNGKQGSSIFLTPAAPTVSGGKPPLSTGPVKKRCHDHRDHSDDASGSSKCHCVKRRKNRVKRTIRVPAVSSKVADIPADEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERATDDPTMLIVTYEGEHRHSMQENVAGGVGLVFESTGTL 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1301 336 MobiDBLite consensus disorder prediction 210 231 - -
Bisa09g1301 336 MobiDBLite consensus disorder prediction 72 95 - -
Bisa09g1301 336 MobiDBLite consensus disorder prediction 193 231 - -
Bisa09g1301 336 SUPERFAMILY WRKY DNA-binding domain 256 318 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa09g1301 336 SMART WRKY_cls 258 318 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa09g1301 336 Gene3D WRKY domain 243 318 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa09g1301 336 FunFam WRKY transcription factor 65 242 319 - -
Bisa09g1301 336 Pfam Plant zinc cluster domain 212 256 IPR018872 -
Bisa09g1301 336 ProSiteProfiles WRKY domain profile. 253 319 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa09g1301 336 Pfam WRKY DNA -binding domain 260 316 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa09g1301 336 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 320 IPR044810 GO:0003700
Bisa09g1301 336 MobiDBLite consensus disorder prediction 78 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1301 Bisa-ChrBisa09 18737116 18738583 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1301 1 332 WRKY Transcription Factor Family AT2G24570 60.519 1.01e-120 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bisa09g1301 WRKY 6.3e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g1301 09 18737116 18738583 Bisa09g1301 09 18737116 18738583 ECH