Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1287 ATGGGTTCAGCTACGAAGGAGCGGGGCAAGCTCAATGAGCCGATGTCTAAACTTGCAAACGATCAGTGTTGGTTGCATTCTCTTTGGCTATTTTCGTTGGGTGAGGGACATGGTGTTGGTGACTTGCTTCATCATGAGCTTGATTATTTCCTGGAGGATGATAGAATTTTCTTTCACTTTGTTCTTTTCTTAAAGGCGGCTGGGGTTCCTGGGGTGACGGAAGTATTATTCCTTGCAAGACAATCTGCAGCTCAAGAGAAAGATAAATCAAGTGAAACCCCCATGCTTTATAGCTGTGGTCTTTGTGGCAAAGGATATAAAAGTTTCAAAGCCCATGCTGAGCATCTCAAGTCTTACGATCATTTGATGCGAGCATCTCAAGCAATTAGTCAATCAAATGACAAGACAATAATCAAGCCACTTACACAATGTGTTGTGAATAGACCTCCTTTTAGAAGAGAGGCAAACAATGCTGAGAGTGAAGGAAGTGAAGATGAATGGGAAGAGGTTGATCCTGAAGATGATTTGGTTAATGATTCTGCAACATTGTTGACTGATTTTAAGGAAAATGAGCATGACGACAATGTTGATATGGATGAAGATGAAGAGGACTATGAGGATTTGGACCCATCATGTTGTATTATGTGTGATAAAAAACATGATACTATAGAAAGTTGCATTGTCCACATGCACAAGCAACATGGGTTCTTCATTCCAGATGAAGAGGACTGTGAGGATTTGTACCCATCATATGAAGATGAAGGTGCTGCAACATTGGGGACTGTGCTATATTGCTATATGGCTTTCAGTAGTCAAATACTTGAATTCCACAGTCAATAA 840 0.406 MGSATKERGKLNEPMSKLANDQCWLHSLWLFSLGEGHGVGDLLHHELDYFLEDDRIFFHFVLFLKAAGVPGVTEVLFLARQSAAQEKDKSSETPMLYSCGLCGKGYKSFKAHAEHLKSYDHLMRASQAISQSNDKTIIKPLTQCVVNRPPFRREANNAESEGSEDEWEEVDPEDDLVNDSATLLTDFKENEHDDNVDMDEDEEDYEDLDPSCCIMCDKKHDTIESCIVHMHKQHGFFIPDEEDCEDLYPSYEDEGAATLGTVLYCYMAFSSQILEFHSQ 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1287 279 Pfam C2H2 type zinc-finger (2 copies) 213 247 IPR041661 -
Bisa09g1287 279 PANTHER ZINC FINGER PROTEIN 622 65 247 IPR040025 -
Bisa09g1287 279 MobiDBLite consensus disorder prediction 150 175 - -
Bisa09g1287 279 MobiDBLite consensus disorder prediction 161 175 - -
Bisa09g1287 279 ProSitePatterns Zinc finger C2H2 type domain signature. 99 121 IPR013087 -
Bisa09g1287 279 SUPERFAMILY beta-beta-alpha zinc fingers 199 246 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1287 Bisa-ChrBisa09 18567893 18569528 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1287 57 246 C2H2 Transcription Factor Family AT4G31420 48.454 1.19e-50 169