Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1265 ATGGGAGAGGTGGAAGTAATGCACTCTGAGATTCTGCAGTTTGAGGGCAAAGACATGAAGTATATGAGTGAAAAAGATGTGTATAATGCACAGTCACATGCAGAGTGCGTACCTGGTGAAGAATCAAGAAGTCAATCAACAGATCACAAAATGATGAATGACTTGCAAGAGAAGGGATATATGCAATATGGATGTGAGCATTATCGAAAGAGATGCCGGATCAGAGCCCCCTGTTGCAATGAGATTTTTTATTGCCACCATTGTCACAATGAAGCAAAAAATGATATCAACATAGATCAGAAGCATAGACATGACATTCCCCGCCATCAAGTCAAACAGGTGATATGTTCGCTTTGTGGGACTGAGCAGGAGGTTCAGCAAAACTGTATTAACTGTGGTGTTTGTATGGGCAAGTACTTCTGTGAAACATGCAAGCTTTTTGATGATGATATATCTAAGCAGCAGTACCATTGCAGTGGCTGTGGGATTTGTAGAGTTGGAGGACGTGGGAATTTCTTCCATTGCTACAAGTGTGGTTGTTGCTATTCAATTCTGCTGAAAAACAGTCACTCTTGCGTGGAAGGAGCAATGCATCATGATTGTCCTGTTTGTTTTGAGTATCTGTTCGAGTCCAGAAACGACGTTACTGTAATGCCGTGTGGACATACAATCCATAAGAGGTGCCTGAAGGAAATGACAGAGCATTTCCAGTATGCATGCCCTCTCTGCTCCAAGTCTGTTTGTGATATGTCAAAGGTTTGGGAGAAGTTTGACATGGAGATTGCCTCTACACCAATGCCTGAACAATATCGAAATAAAATGGTTTGGATCCTCTGCAATGACTGTGGTAAAACTTGTCAAGTTCAGTATCATATTGTGGCACAAAAATGTTTGAACTGTAAATCGTACAATACGAGACAAACGAGAGGCTGA 933 0.4159 MGEVEVMHSEILQFEGKDMKYMSEKDVYNAQSHAECVPGEESRSQSTDHKMMNDLQEKGYMQYGCEHYRKRCRIRAPCCNEIFYCHHCHNEAKNDINIDQKHRHDIPRHQVKQVICSLCGTEQEVQQNCINCGVCMGKYFCETCKLFDDDISKQQYHCSGCGICRVGGRGNFFHCYKCGCCYSILLKNSHSCVEGAMHHDCPVCFEYLFESRNDVTVMPCGHTIHKRCLKEMTEHFQYACPLCSKSVCDMSKVWEKFDMEIASTPMPEQYRNKMVWILCNDCGKTCQVQYHIVAQKCLNCKSYNTRQTRG 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1265 310 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 40 309 - -
Bisa09g1265 310 SUPERFAMILY Zinc hairpin stack 137 194 IPR037275 -
Bisa09g1265 310 ProSiteProfiles Zinc finger CHY-type profile. 58 134 IPR008913 GO:0008270
Bisa09g1265 310 ProSiteProfiles Zinc finger RING-type profile. 201 244 IPR001841 -
Bisa09g1265 310 ProSiteProfiles Zinc finger CTCHY-type profile. 136 200 IPR017921 -
Bisa09g1265 310 CDD RING-H2_Pirh2-like 200 244 - -
Bisa09g1265 310 Pfam CHY zinc finger 65 146 IPR008913 GO:0008270
Bisa09g1265 310 SUPERFAMILY CHY zinc finger-like 62 136 IPR037274 GO:0008270
Bisa09g1265 310 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 195 246 IPR013083 -
Bisa09g1265 310 SUPERFAMILY RING/U-box 200 249 - -
Bisa09g1265 310 Pfam Ring finger domain 200 243 IPR001841 -
Bisa09g1265 310 Gene3D - 272 310 - -
Bisa09g1265 310 SMART ring_2 201 243 IPR001841 -
Bisa09g1265 310 Pfam Zinc-ribbon 248 306 IPR039512 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1265 Bisa-ChrBisa09 18278922 18281728 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1265 63 306 C2H2 Transcription Factor Family AT3G18290 40.000 7.36e-54 187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g1265 09 18278922 18281728 Bisa09g1265 09 18278922 18281728 ECH