Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1258 ATGTCTGTCAAATCGGCGCAATCATCATTTCGGGATCGGACACAAGAATTTCAGAGTATTGCGGAGAGGCTAAAGAAGTCATTGCCATCAGGATTAGGCCCAAATGGGCTAAGCAGTAGTTCGAGATCAGATGATCAGCGATCTAATGTCGCAATTCAGTCAGAGTTCAATCGGAGGGCTTCTAAGATTGGATATGGGATACACCAGACGTCTCAGAAGCTTGCTAAGCTGGCCAAGTTGGCAAAAAGGACTTCGGTTTTTGATGACCCCACTATGGAAATCCAAGAGCTTACAGCAATTATTAAGCAAGATATTACTGCACTGAACTCTGCTGTCGTGGATCTTCAGCTACTGAGCAACTCAAGAAATGAGAGTGGAAATATCTCTAGTGACACTACTAGCCATTCAACCACAGTTGTAGATGACCTTAAAAATCGATTAATGGGTGCCACTAAAGAGTTTAAAGAAGTCCTAACCATGCGAACCGAGAACATGAAAGTACATGAGAACAGAAGACAATTGTTTTCTTCCACTGCTTCAAAGGATTCTGCAAACCCTTTTGTCCGTCAACGACCATTGGCTTCAAGAACGGCTGCTAGTTCTTTTGATGCCCCAGCTCCCCCGTGGGCCGGTGGGTCAAAATCTTCATCCCAGCTATCTTCTAAGAAACAGGAGGATGGGGAGAGTCAACCTTTGCTGCAGCAGCAGCAGCAACAGCAACAGCAAATGGTTCCATTGCAAGATAGTTACATGCAAAGCAGAGCTGAAGCTCTTCAGAATGTTGAGTCCACTATTCATGAGCTAAGCAGCATCTTTAACCAATTGGCAACACTTGTTTCCCAACAAGGAGAGCTTGCTATCAGGATTGATGAGAACATGGATGATACATTGGCAAACGTAGAGGGGGCACAGGGAGCTTTGTTGAAGTATCTTAACAGCATATCTTCTAATAGGTGGCTGATGATCAAGATATTTTTTGTATTAATATTTTTCCTCATGGTTTTCCTATTTTTTGTGGCATAG 1023 0.434 MSVKSAQSSFRDRTQEFQSIAERLKKSLPSGLGPNGLSSSSRSDDQRSNVAIQSEFNRRASKIGYGIHQTSQKLAKLAKLAKRTSVFDDPTMEIQELTAIIKQDITALNSAVVDLQLLSNSRNESGNISSDTTSHSTTVVDDLKNRLMGATKEFKEVLTMRTENMKVHENRRQLFSSTASKDSANPFVRQRPLASRTAASSFDAPAPPWAGGSKSSSQLSSKKQEDGESQPLLQQQQQQQQQMVPLQDSYMQSRAEALQNVESTIHELSSIFNQLATLVSQQGELAIRIDENMDDTLANVEGAQGALLKYLNSISSNRWLMIKIFFVLIFFLMVFLFFVA 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1258 340 Gene3D - 48 303 - -
Bisa09g1258 340 MobiDBLite consensus disorder prediction 23 48 - -
Bisa09g1258 340 MobiDBLite consensus disorder prediction 211 246 - -
Bisa09g1258 340 PANTHER SYNTAXIN 51 332 IPR045242 -
Bisa09g1258 340 SMART tSNARE_6 243 310 IPR000727 -
Bisa09g1258 340 Pfam SNARE domain 285 336 IPR000727 -
Bisa09g1258 340 MobiDBLite consensus disorder prediction 168 246 - -
Bisa09g1258 340 CDD SNARE_syntaxin5 251 329 - -
Bisa09g1258 340 ProSitePatterns Syntaxin / epimorphin family signature. 254 293 IPR006012 GO:0005484|GO:0006886|GO:0016020
Bisa09g1258 340 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 7 26 IPR021538 -
Bisa09g1258 340 SUPERFAMILY t-snare proteins 54 303 IPR010989 GO:0016020|GO:0016192
Bisa09g1258 340 MobiDBLite consensus disorder prediction 32 48 - -
Bisa09g1258 340 MobiDBLite consensus disorder prediction 171 185 - -
Bisa09g1258 340 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 248 310 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1258 Bisa-ChrBisa09 18161923 18174842 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1258 1 340 SNARE and Associated Proteins AT3G24350 64.738 1.73e-147 418
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g1258 09 18161923 18174842 Bisa09g1258 09 18161923 18174842 ECH