Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1247 ATGGGGGTGGATTACTACGAGATATTGAACGTTGATAAAAATGCGACAGACGAAGATCTTAAAAAGTGGTACAGAAAGTTGGCCATGAAATGGCATCCTGACAAGAACCCCAACGACAAAAAAGAAGCTGAAGCCAAATTCAAGCAGATCTCTGAAGCCTACGAGGCAAGAATTTATTCTCATCCACCCAATAGTTACATTCACATTACTCGAGTACTAAGTGACCCTCAGAAAAGGGCGGTTTATGATCAGCACGGAGAGGAAGGCTTGAAAGATGTGCCAAGACCTGGGAGTGGACCATCAAGTGGGTTTAATCCGAGAAACGCAGAGGATATTTTTGCAGAATTCTTTGGCAGTAGCCCTTTTGGATTTGGATCATCGGGAGGGCTAGGAAGGTCCACGAGGTACCAGTCTGACGGAGCCGGAATGTATGGTGGCTTCAATGGAAGTGACAATGTTTTTCGTCCATACAATGAGGGTAAGCAAATGCCAAAAAAGCCACCACCTGTGGAGAGCAAACTGCCTTGCAGCCTGGAGGAGTTGTACTCTGGATCCACAAGGAAAATGAAGATCTCAAGGACTGTTGATGCCAATGGACGGAAAGTTACAGAATCAGAGATATTAACCATTGAAGTAAAGCCGGGGTGGAAGAAAGGGACAAAGATAACATTCCCAGATAAAGGGAATCAGCAAACAAATCAACTGCCAGCAGACCTTGTATTCGTGATTGATGAAAAGCCTCATAATTTGTACACGAGAGATAGCAACGACCTCATAATGAGTCATAGGGTGTCACTAGCAGAGGCCATCGGAGGAACAACAGTATATGTCCCCACACTTGATGGACGGAGTCTATCAATACCAGTGACTGACATTGTGACCCCTGGTTATGAGCTTCTTGTTGCAAAGGAGGGGATGCCAATAGCAAAGGAGCCTGGGAATAGAGGTGATTTGAAGGTCAAATTTCAGGTGAAGTTCCCTACAAAGTTGACGCCAGAGCAACGAGCAGGGCTCAGGCGTGCACTGGGAGGTTGA 1035 0.4589 MGVDYYEILNVDKNATDEDLKKWYRKLAMKWHPDKNPNDKKEAEAKFKQISEAYEARIYSHPPNSYIHITRVLSDPQKRAVYDQHGEEGLKDVPRPGSGPSSGFNPRNAEDIFAEFFGSSPFGFGSSGGLGRSTRYQSDGAGMYGGFNGSDNVFRPYNEGKQMPKKPPPVESKLPCSLEELYSGSTRKMKISRTVDANGRKVTESEILTIEVKPGWKKGTKITFPDKGNQQTNQLPADLVFVIDEKPHNLYTRDSNDLIMSHRVSLAEAIGGTTVYVPTLDGRSLSIPVTDIVTPGYELLVAKEGMPIAKEPGNRGDLKVKFQVKFPTKLTPEQRAGLRRALGG 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1247 344 SUPERFAMILY HSP40/DnaJ peptide-binding domain 169 248 IPR008971 GO:0006457|GO:0051082
Bisa09g1247 344 Gene3D DnaJ domain 3 127 IPR036869 -
Bisa09g1247 344 SMART dnaj_3 3 78 IPR001623 -
Bisa09g1247 344 Pfam DnaJ C terminal domain 170 327 IPR002939 -
Bisa09g1247 344 SUPERFAMILY Chaperone J-domain 3 131 IPR036869 -
Bisa09g1247 344 ProSiteProfiles dnaJ domain profile. 4 86 IPR001623 -
Bisa09g1247 344 CDD DnaJ 4 55 IPR001623 -
Bisa09g1247 344 Gene3D - 169 246 - -
Bisa09g1247 344 FunFam Dnaj homolog subfamily b member 165 246 - -
Bisa09g1247 344 MobiDBLite consensus disorder prediction 83 104 - -
Bisa09g1247 344 Gene3D - 247 343 - -
Bisa09g1247 344 PRINTS DnaJ domain signature 6 24 IPR001623 -
Bisa09g1247 344 PRINTS DnaJ domain signature 78 97 IPR001623 -
Bisa09g1247 344 PRINTS DnaJ domain signature 24 39 IPR001623 -
Bisa09g1247 344 PRINTS DnaJ domain signature 42 62 IPR001623 -
Bisa09g1247 344 CDD DnaJ_C 168 330 - -
Bisa09g1247 344 FunFam DNAJ heat shock family protein 247 342 - -
Bisa09g1247 344 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 342 - -
Bisa09g1247 344 SUPERFAMILY HSP40/DnaJ peptide-binding domain 251 336 IPR008971 GO:0006457|GO:0051082
Bisa09g1247 344 Pfam DnaJ domain 4 55 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1247 Bisa-ChrBisa09 17992337 17994438 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1247 5 85 C2H2 Transcription Factor Family AT1G74250 34.118 2.77e-07 50.4