Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1245 ATGTACAAAGTACAAAGCAGGGAGCAGCATTTGCTTTGGTTCAGTTCAGAGGAAGATATTATGGAAATTCTCTCACCAAAATTATATCTTGAAGGTTTATCCGACACTTACCCATTATTGATGGAGCAGCCAGGGCCCTCAAATGACAATCATTGCATTATTGACATAGCTAGGAGTAGTGAAGCTTCAACATCTTCCTCTCTTCACGATGGGCATTTTACTAGCATAGGTACATCACAACATGAAGAGAGACCTACTACCACAAGATTACCTGCTTCTCAGCCGTCAGTTTCTGTTGTATCTAATGGTACAAATTCTAGGATTTCTTCTTCTGTAAGACGAGGGGATACTCGTAGGCACAGGAATCCATTGAATTCAGGGTTATGGATTTCTATTGAGCTAGTCCTCACAGTTAGCCAGATTGTTGCATCTATTGTTGTTTTGTCTTTGTCAAGGCATGAGCAACCACGTACTCCATTGTTTGCATGGATTGTGGGTTATGCATCCGGATGCGTTGCTACTCTCCCTCTACTTTATTGGAGGTATTATCATCATAACCAGAATCGAGAGCAAAATTCATCTCAACAACGTCAAGCTTCTCCTCGAGTTAATGTTTCTTCAGGGACACTTCTTTCTTTTTCCAGAACTAATGGAGGAGAAGATGATCTGGCTGCGACTTCATCCTCCCGAAGCAGTCAAGTTCCAGGATTAATGAATATTAGACTGAAGGTGATGGTGGATTATTTCAAAATGGCCTTGGATTGCTTTTTTGCCATATGGTTTGTTGTTGGAAATGTATGGATCTTTGGTGGACACTCTTCTGCCAGCGAAGCTCCTAACTTGTATAGGTTATGTATTGTGTTTCTTACCTTCAGCTGTATTGGCTATGCTATGCCCTTCATTCTATGTGCAACAATCTGCTGTTGTCTGCCTTGTATAATTTCCATCCTTGGAGTTAGAGAGGATCTGACACAAAATAGAGGGGCAACTTCTGAATCCATTAATGCCCTGCCAACTTACAAGTTCAAGATGAAAAAACGTAAAAACAGTGATCAAAGCAACCCAAATGTTTGTGAAGGTGGAATTGTGGCTGCAGGAACTGAACAGGAGCGTGTTATCTCTGGAGAAGATGCGGTCTGCTGCATCTGCCTGGCAAAGTATGAAAATAACGATGAGCTGAGAGAGTTGCCTTGTTCCCATCTTTTTCACAAAGACTGTGTAGACAAGTGGCTGAAGATAAATGCGTTATGCCCTCTTTGCAAAAGTGAGGTTGGTCTGAACGTAACAGGATCATTATCTGGTGAAGGTGCCAGCCTACAAAGGGGTGAGGGAAGGATTGGGAATAGCCCAGTTAGTAGCATAGTATAA 1368 0.4203 MYKVQSREQHLLWFSSEEDIMEILSPKLYLEGLSDTYPLLMEQPGPSNDNHCIIDIARSSEASTSSSLHDGHFTSIGTSQHEERPTTTRLPASQPSVSVVSNGTNSRISSSVRRGDTRRHRNPLNSGLWISIELVLTVSQIVASIVVLSLSRHEQPRTPLFAWIVGYASGCVATLPLLYWRYYHHNQNREQNSSQQRQASPRVNVSSGTLLSFSRTNGGEDDLAATSSSRSSQVPGLMNIRLKVMVDYFKMALDCFFAIWFVVGNVWIFGGHSSASEAPNLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISILGVREDLTQNRGATSESINALPTYKFKMKKRKNSDQSNPNVCEGGIVAAGTEQERVISGEDAVCCICLAKYENNDELRELPCSHLFHKDCVDKWLKINALCPLCKSEVGLNVTGSLSGEGASLQRGEGRIGNSPVSSIV 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1245 455 ProSiteProfiles Zinc finger RING-type profile. 380 421 IPR001841 -
Bisa09g1245 455 SMART ring_2 380 420 IPR001841 -
Bisa09g1245 455 MobiDBLite consensus disorder prediction 63 111 - -
Bisa09g1245 455 MobiDBLite consensus disorder prediction 435 455 - -
Bisa09g1245 455 Pfam Ring finger domain 380 421 IPR001841 -
Bisa09g1245 455 FunFam E3 ubiquitin-protein ligase 363 429 - -
Bisa09g1245 455 SUPERFAMILY RING/U-box 371 426 - -
Bisa09g1245 455 MobiDBLite consensus disorder prediction 63 119 - -
Bisa09g1245 455 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 41 424 - -
Bisa09g1245 455 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 364 431 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1245 Bisa-ChrBisa09 17966331 17970025 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1245 33 425 C3H Transcription Factor Family AT1G80400 53.769 3.68e-145 419