Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1239 ATGGCTCAGCATAACAATGGCAACAATAGTGCGAGCCAACAGTTGGTGAATCCAGTCTTCCATGATTTTCTGGGCATGAAGCCCACTGATTCACTGGTCGTTGTGGCCCCTAAATCCGCCGATGCTAGGCTGTCGGAGGCGTCGCCGTCGTCGGCATCGGTGTCTGTTGCCGCCTCTTCTGGCGGTCCCCGTGGCCCCTTCTCCACCACGTCTGATATCGCCTCCGAAAGACAGGTAGGGAATCATCTTGAGGGAGTTCCATATTATGGCCCGAGGAGTGATTTTTCTGGCACTGGGATAAGTAACAGACTAGTAGGAAACAAGAGAAGCAATTCTGAGTCCACTTTCATGGGTTCCTCCCGAGATGCGTTCCAAATGGTCCCTGACTCCTTTCAAAACTCACATTTGATGAAGATTCTCCGGAGTACAGCTGGAGGAGAGCAGCATAGAAGGTCCAATGATGATGAAATTTTTCTTGGGATGCAGCCACTGAAGCCAACTTCATCTTCTCAGATATTTCAGTCTTCTGCTGCAACTAAAATTGATGCCAATAAATGGGAGCGATCTATTGTCATGAATGTTGGCCCTTCAATGCAGCATCCATCACGTGGGTCTCCATTAACACCTTTTGTGCATCAGATAGCTTCAAACAAGATCAGGGATAATACCTCCAATATTGGACCTTCATTTATCTCTCAGTCAGCTGCTGACGAAGGATCTCGAACTGGAATCAAGGGCCCTGGAATTTTGAGTTCTCTAAATACAGCAGCTGCTGCCACTGAGAAAGCTTCATCTGCAGTGGTTCTTGGTGGAGGCAGGCCTAAGCCTGTGTCTAACATAATAGACTTAGAATCCTCCACACCTCCGAGCAGGCATGAGTTAAGATCTGCCAGCTGCCAGATGACTATTTTCTATGGAGGTCAAGCTCATGTGTTTGATGATGTCCACCCTAATAAGGCGGATGTAATAATGAGCTTAGCAGGGTCTAGTGGTGGAAGCTGGTCCACGGCCACAACATGCTCACCCAAACCTCCTCTCAGTAACTTGCTTTCTGCAACGGATCATATTGAAACTGGCAAGCTTCATGCCATTCCCTCTACCGATCGCATATCTACTCCACCAGGGCCGCCTCAAGGGAGCGTGATAACTAAAGATATGAGAAACCCGGTACAAGCAGCGGAACCCACTTCTCAAGACAAAAGGGCACAATGA 1212 0.4843 MAQHNNGNNSASQQLVNPVFHDFLGMKPTDSLVVVAPKSADARLSEASPSSASVSVAASSGGPRGPFSTTSDIASERQVGNHLEGVPYYGPRSDFSGTGISNRLVGNKRSNSESTFMGSSRDAFQMVPDSFQNSHLMKILRSTAGGEQHRRSNDDEIFLGMQPLKPTSSSQIFQSSAATKIDANKWERSIVMNVGPSMQHPSRGSPLTPFVHQIASNKIRDNTSNIGPSFISQSAADEGSRTGIKGPGILSSLNTAAAATEKASSAVVLGGGRPKPVSNIIDLESSTPPSRHELRSASCQMTIFYGGQAHVFDDVHPNKADVIMSLAGSSGGSWSTATTCSPKPPLSNLLSATDHIETGKLHAIPSTDRISTPPGPPQGSVITKDMRNPVQAAEPTSQDKRAQ 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1239 403 SMART tify_2 294 329 IPR010399 -
Bisa09g1239 403 MobiDBLite consensus disorder prediction 44 71 - -
Bisa09g1239 403 Pfam tify domain 297 328 IPR010399 -
Bisa09g1239 403 MobiDBLite consensus disorder prediction 363 403 - -
Bisa09g1239 403 ProSiteProfiles Tify domain profile. 294 329 IPR010399 -
Bisa09g1239 403 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 95 362 IPR040390 -
Bisa09g1239 403 MobiDBLite consensus disorder prediction 43 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1239 Bisa-ChrBisa09 17880695 17885038 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1239 1 327 Tify Gene Family AT4G32570 38.841 1.19e-49 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Bisa09g1239 tify 7e-15 No_clan