Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1210 ATGGAAGCTACTGCGGGAATGGTGGCTGGGTCGCATAAGAGGAACGAACTTGTTCGAATTCGGCACGATTCAGATAGTGGGTCCAAACCCTTAAAGAATTTGAATGGCCAAATCTGTCAAATTTGTGGCGATACTGTTGGATTAACAGCAACTGGTGATGTCTTTGTTGCTTGCAATGAGTGTGCCTTCCCAGTTTGTCGTCCTTGTTATGAGTATGAGCGAAAAGATGGGAACAAGTCTTGCCCCCAGTGCAAGACTAGGTACAAAAGGCACAAAGGGAGTCCACGAGTGGAGGGAGATGATGATGAGGATGATGTTGATGATCTAGAAAATGAATTCAATTATGGCCAAGGAAAAACCAAGGCTAGGCGGCAGTGGGAAGGAGAAGATGCTGACCTCTCTTCATCTTCTAGACATGATTCTCAACAACCAATTCCCCTTCTAACCAATGGACAGCCGATGTCTGGTGAGATTCCTTGTGCAACACCTGACACCCAATCTGTACGAACTACATCGGGTCCTTTGGGTCCATCTGAAAAGGTTCACTCACTTCCTTATATTGATCCAAGGCAACCAGTCCCAGTGAGAATTGTAGACCCTTCAAAGGATTTGAATTCATATGGTCTGCCAAATATTGACTGGAAAGAAAGAGTTGAAGGTTGGAAGCTCAAGCAGGAGAAAAATATGGTGCAAATGACTGGTAGATACAACGAAGGGAAGGGGGGAGACATGGAAGGGACAGGTTCCAATGGAGAAGAACTGCAAATGGTTGATGATGCTCGACAGCCTTTGAGTCGTGTGGTGCCTATTTCTTCTTCTCAATTGACCCCTTATCGTGTTGTGATCATACTCCGGCTTATTATTCTTGGCTTCTTCTTACAATACCGTGTAACTCACCCTGTCAATGATGCTTACCCCTTGTGGTTGACATCAGTTATCTGTGAGATTTGGTTTGCCTTATCCTGGCTCTTGGATCAGTTTCCAAAATGGTCTCCCATTAATCGTGAGACCTACCTTGACAGGCTTACTTTAAGATACGATCGCGACGGAGAACCATCTCAGTTAGCTCCTGTGGATGTATTTGTCAGTACAGTGGATCCCCTCAAAGAGCCTCCTCTTGTAACTGCAAACACCGTTTTGTCAATACTTTCTGTTGATTACCCTGTAGACAAGATTTCCTGCTATGTATCAGATGATGGTTCAGCCATGTTGACTTTTGAAGCCCTTTCAGAAACAGCTGAGTTTGCAAAGAAGTGGGTACCCTTCTGCAAAAAGCACAATATTGAGCCAAGAGCCCCTGAGTTCTATTTTGCCCAAAAGATTGATTACTTGAAGGACAAAATTCAACCTTCTTTTGTGAAGGAGCGCCGATTAATGAAGAGAGATTATGAAGAATTCAAAGTACGGATCAATGCCCTGGTTGCCAAAGCTCAAAAGATGCCAGAAGAAGGTTGGACAATGCAGGATGGAACTCCCTGGCCTGGAAATAATCCTAGGGATCATCCTGGAATGATTCAGGTGTTCTTAGGTCATAGTGGAGGGTTTGATACAGATGGAAACGAGCTACCTAGACTTGTTTATGTTTCTCGTGAGAAGCGACCAGGCTTCCAGCATCACAAGAAAGCCGGAGCCATGAATGCTTTGATTCGAGTTTCAGCTGTCTTGACCAATGGTGCATACTTGTTGAACGTTGATTGTGACCACTATTTCAATAATAGCAAAGCTGTTAAAGAAGCCATGTGTTTCATGATGGATCCTGTTCTTGGAAAGAAGACTTGCTATGTGCAATTCCCTCAGCGGTTTGATGGCATTGATATGCACGATCGATATGCCAATCGCAATATTGTGTTCTTTGATATCAACATGAAAGGGCAGGATGGTATCCAGGGCCCAGTCTATGTCGGAACTGGTTGTTGTTTCAATAGACAGGCTCTATATGGTTATGATCCTGTTTTGACTGAGGAAGATTTGGAGCCCAATATTATTGTTAGGAGTTGCTGGGGTTCTAGAAAGAAGGGAAGGGGTGGCAATAAGAAGTACATAGACAAGAAGAGGGCAGCAAAAAGAACTGAATCTACCATTCCCATCTTCAATATGGAAGACATAGAGGAGGGTGTTGAAGGATATGATGATGAGAGGTCACTTCTTATGTCCCAGAAGAGCCTAGAGAAGCGATTTGGTCAGTCCCCAGTTTTTATTGCTGCCACTTTCATGGAGCAGGGTGGCATTCCTCCCTCAACCAACCCTGCAACTCTTCTAAAGGAAGCAATCCATGTTATCAGCTGTGGTTATGAAGACAAGACAGAATGGGGCAAAGAGATTGGATGGATCTATGGTTCTGTGACCGAAGATATTTTGACTGGGTTCAAGATGCATGCTCGTGGCTGGATCTCCATCTATTGCATGCCACTTCGCCCAGCATTTAAGGGTTCTGCTCCTATCAATCTTTCTGACCGTCTTAATCAGGTGCTTCGATGGGCCTTAGGGTCAATTGAGATTTTCCTTAGCAGGCACTGCCCCCTATGGTATGGCTACAATGGGAGATTGAAGTCCCTGCAGAGGCTGGCTTATATCAACACAATTGTCTACCCCCTTACCTCAATCCCACTGATTGCCTACTGTGTGCTTCCTGCATTTTGTCTTCTCACAAATAAATTTATTATTCCAGAGATAAGCAACTTTGCTAGCATGTGGTTCATTCTTCTCTTCGTCTCCATTTTTGCTACTTCAATTCTTGAGCTTAGGTGGAGTGGGGTTGGTATAGAAGACTGGTGGAGGAATGAACAGTTTTGGGTTATTGGTGGTACATCCGCACATCTGTTTGCTGTATTCCAAGGGCTTCTAAAAGTGCTGGCAGGTATCGATACAAATTTCACTGTCACGTCAAAGGCATCAGATGACGATGGGGATTTTGCCGAGCTTTATGTGTTCAAATGGACATCACTTTTGATCCCTCCTACAACAGTCCTTCTAGTTAACTTGGTAGGGATTGTTGCTGGTGTGTCCTATGCCATAAACAGTGGTTACCAATCATGGGGTCCTCTATTTGGGAAGCTGTTTTTTGCTATATGGGTCATTGCCCATCTATACCCTTTCTTGAAGGGTCTGTTGGGAAGGCAAAACCGTACACCAACCATTGTTATTGTTTGGTCTATTCTCCTTGCTTCCATATTCTCCTTGCTGTGGGTGAGGATCGACCCCTTCACCACTGACTCCACCAAAGCTTCTTCCAATGGTCAATGTGGCATCACATGCTAG 3258 0.4444 MEATAGMVAGSHKRNELVRIRHDSDSGSKPLKNLNGQICQICGDTVGLTATGDVFVACNECAFPVCRPCYEYERKDGNKSCPQCKTRYKRHKGSPRVEGDDDEDDVDDLENEFNYGQGKTKARRQWEGEDADLSSSSRHDSQQPIPLLTNGQPMSGEIPCATPDTQSVRTTSGPLGPSEKVHSLPYIDPRQPVPVRIVDPSKDLNSYGLPNIDWKERVEGWKLKQEKNMVQMTGRYNEGKGGDMEGTGSNGEELQMVDDARQPLSRVVPISSSQLTPYRVVIILRLIILGFFLQYRVTHPVNDAYPLWLTSVICEIWFALSWLLDQFPKWSPINRETYLDRLTLRYDRDGEPSQLAPVDVFVSTVDPLKEPPLVTANTVLSILSVDYPVDKISCYVSDDGSAMLTFEALSETAEFAKKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRLMKRDYEEFKVRINALVAKAQKMPEEGWTMQDGTPWPGNNPRDHPGMIQVFLGHSGGFDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKAVKEAMCFMMDPVLGKKTCYVQFPQRFDGIDMHDRYANRNIVFFDINMKGQDGIQGPVYVGTGCCFNRQALYGYDPVLTEEDLEPNIIVRSCWGSRKKGRGGNKKYIDKKRAAKRTESTIPIFNMEDIEEGVEGYDDERSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPSTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPLRPAFKGSAPINLSDRLNQVLRWALGSIEIFLSRHCPLWYGYNGRLKSLQRLAYINTIVYPLTSIPLIAYCVLPAFCLLTNKFIIPEISNFASMWFILLFVSIFATSILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDDDGDFAELYVFKWTSLLIPPTTVLLVNLVGIVAGVSYAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRIDPFTTDSTKASSNGQCGITC 1085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1210 1085 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 112 IPR013083 -
Bisa09g1210 1085 MobiDBLite consensus disorder prediction 122 136 - -
Bisa09g1210 1085 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 262 1051 - -
Bisa09g1210 1085 SUPERFAMILY RING/U-box 22 111 - -
Bisa09g1210 1085 MobiDBLite consensus disorder prediction 74 187 - -
Bisa09g1210 1085 MobiDBLite consensus disorder prediction 137 177 - -
Bisa09g1210 1085 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 517 658 IPR029044 -
Bisa09g1210 1085 ProSiteProfiles Zinc finger RING-type profile. 39 85 IPR001841 -
Bisa09g1210 1085 Pfam Cellulose synthase 358 1076 IPR005150 GO:0016020|GO:0016760|GO:0030244
Bisa09g1210 1085 FunFam Cellulose synthase 475 649 - -
Bisa09g1210 1085 CDD mRING-HC-C4C4_CesA 37 87 - -
Bisa09g1210 1085 Pfam Zinc-binding RING-finger 29 106 IPR027934 -
Bisa09g1210 1085 SUPERFAMILY Nucleotide-diphospho-sugar transferases 376 660 IPR029044 -
Bisa09g1210 1085 FunFam Cellulose synthase 21 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1210 Bisa-ChrBisa09 17415410 17422092 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1210 1 1083 Glycosyltransferase AT4G32410 86.267 0.0 1916