Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1196 ATGGCGCAATTGCTACATGGGACGCTTCATGTAACTATAGTTGATATTGACAAGTTGCACCATACTGGATGCAACTATGCTTTTTGCGATAAGAATACGCCTAACAAGGGGAAGAGATTTCTAGCCCAAGTCAAGAGTTGTTTGCTGTGTCGGCCAGAGCTTGTTGGGACCAAGCTGTATGCAACAGTTGATTTGGATAAAGCCAGAGTTGCGAGAACTAGGCTGATAAAACGTCTGACCTCTAACCCCAAGTGGAATGAGAGCTTTCACATATACTGTGCCCACAATGTATCAAACGTTGTTTTCACAGTCAAAGATGGAAATCCCATTGGAGCAACTCTGATTGGAAGAGCTTATGTCTCTGTGGATGAATTCCTCACCAGAGGCCCAATCGACAGAAAGGTTGAGATATTAGATGACGATGATCTTCCTATACCAGGGGAATCCAAAATCCATGTCAAGATTGAGTTTAGAAGTGTTACCTCTGACCCAAACTGGTCTCAGGGAATACAGAATCCACTCTTTCCTGGAGTTCCTCGCGCATTCTTCAACCAGAGACAAAACTGCAGAGTCACTTTATACCAGGATGCACATGTTCTTGATGAATTTATGTTGTCCTTCCCGTTGTCCAGAGGAGGTGAATCTTATAAGCCAGGAAGATGTTGGGAGGACATTTTGGATGCCATTATGGGTGCACAGTACTTGATTTACATAGCTGGGTGGTCTGTTTACACTGAGATAACCTTAGTTAGGGACACAGAGAGGCCATCTGAAATGGGACACTTGACTTTAGGGAATCTGCTGAAGAAGAAAGCTGATGAAGGAGTGGAAGTGCTTGTGCTTGTTTGGGATGACAGAACTTCTGATGATATTAGAAAGTATGGGTTGATGGCAACCCATGATCAAGAAACTGCAGATTACTTTAGGAACACTCGAGTAAAATGCGTGTTGTGCCCCAGAAATCCTGATGTTGGAAAAAGCATGATTCAGGGGCTTCAAACTTCAACTATGTTCACTCACCACCAAAAAGTAGTGGTTGTTGACAGTGACTCGCCTGAGGTGCCTAACAATGAAGAATCACAGGAGAGGCGGATCATAAGTTTTATTGGTGGGATTGATCTGTGTGATGGGAGATATGATACACATGAACATCCCTTGTTTTCAACTCTGAAAACAATCCACCATGATGATTTTCATCAGCCAAACTTCCCAGATGCTTCAATCACGAAGGGTGGTCCAAGAGAGCCATGGCATGACATTCACTGCAAACTAGAAGGACCTATAGCTTGGGATGTCTTGTACAATTTTGAGCAGAGGTGGAAGAAGCAAGCTAAGAAGGACCACTTAATCCCTCTAACCTGGCATGATGAGATTTTTGTCCATCCATCTGAAGTAACAACATCAGAAGACACAGAGACCTGGACTGTTCAACTGTTCAGGTCCATAGATGGTGGTGCTGTTTCTGGGTTCCCTCAAGACCCAGAAGAAGCAGCTGAACTAGGCCTTGTTAGTGGGAAAAACAACATCATTGACAGAAGCATTCAGGACGCTTACATAAATGCTATAAGGCGGGCCAAGAATTTCATCTACATTGAAAATCAGTATTTCCTAGGGAGTTCATACGGTTGGGAAGAATCTGACATATGTGTTCCAGATATTGGGGCTTTACATTTGATACCAAAAGAGCTGTCTTTAAAGATTGTGAGCAAGATTGAAGCAGGAGAGAGGTTTGTTGTGTACATTGTGATCCCAATGTGGCCAGAAGGTGAACCTGAGAGTGCCCAAGTTCAGGCAATATTAGATTGGCAAAGGAGGACAATAAAGATGATGTACCGTGATATAGCTGAAGCCATCCAGAAAAAAGGACTCAAAGGTGAAGCCCACCCTAGAGATTATCTGACATTTTTCTGCCTTGGAAATCGAGAACTCGAGAAAGATGGAGAATATATTCCCCCGAATCCACCAGATCCTGATAGTGATTATGGCAGAGCACAAAAATCCAGACGCTTCATGATCTACGTTCATTCAAAGATGATGATAGTGGATGATGAGTATATAATAGTTGGTTCAGCCAACATAAACCAGAGATCAATGGATGGTGGAAGGGACACGGAAATTGCAATGGGGGGATTCCAACCACATCATTTGACATCGAATGAACGACCGCGAGGTCAGATACATGCGTTCAGAAGGGCATTATGGTTTGAGCATCTTGGAGATGCTGATGCACTAGTGTTTGATCGTCCAGAAAGTGAGGACTGTGTGAACATTGTGAATTTTCTTGCAGAGGAGAACTGGAATATGTACTCAAAACAAACATTTGATGAAAATGATTCGAAAAGTTTTAAACACCTCCTGCGTTACCCCATAGAAATAACTGAAGATGGGGATGTAACTATACTACCCGGATTCGAATTCTTTCCTGACACACAGGCTCCGATTCTGGGCAAAAAATCTGAATATCTCCCTTCTATTGTAGGCAGAAAATCTGTGTATCTTCCTCCTATTCTCACCACTTAA 2520 0.4294 MAQLLHGTLHVTIVDIDKLHHTGCNYAFCDKNTPNKGKRFLAQVKSCLLCRPELVGTKLYATVDLDKARVARTRLIKRLTSNPKWNESFHIYCAHNVSNVVFTVKDGNPIGATLIGRAYVSVDEFLTRGPIDRKVEILDDDDLPIPGESKIHVKIEFRSVTSDPNWSQGIQNPLFPGVPRAFFNQRQNCRVTLYQDAHVLDEFMLSFPLSRGGESYKPGRCWEDILDAIMGAQYLIYIAGWSVYTEITLVRDTERPSEMGHLTLGNLLKKKADEGVEVLVLVWDDRTSDDIRKYGLMATHDQETADYFRNTRVKCVLCPRNPDVGKSMIQGLQTSTMFTHHQKVVVVDSDSPEVPNNEESQERRIISFIGGIDLCDGRYDTHEHPLFSTLKTIHHDDFHQPNFPDASITKGGPREPWHDIHCKLEGPIAWDVLYNFEQRWKKQAKKDHLIPLTWHDEIFVHPSEVTTSEDTETWTVQLFRSIDGGAVSGFPQDPEEAAELGLVSGKNNIIDRSIQDAYINAIRRAKNFIYIENQYFLGSSYGWEESDICVPDIGALHLIPKELSLKIVSKIEAGERFVVYIVIPMWPEGEPESAQVQAILDWQRRTIKMMYRDIAEAIQKKGLKGEAHPRDYLTFFCLGNRELEKDGEYIPPNPPDPDSDYGRAQKSRRFMIYVHSKMMIVDDEYIIVGSANINQRSMDGGRDTEIAMGGFQPHHLTSNERPRGQIHAFRRALWFEHLGDADALVFDRPESEDCVNIVNFLAEENWNMYSKQTFDENDSKSFKHLLRYPIEITEDGDVTILPGFEFFPDTQAPILGKKSEYLPSIVGRKSVYLPPILTT 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1196 839 Gene3D Endonuclease Chain A 211 472 - -
Bisa09g1196 839 PIRSF PLD_plant 1 827 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Bisa09g1196 839 SMART pld_4 670 697 IPR001736 GO:0003824
Bisa09g1196 839 SMART pld_4 336 378 IPR001736 GO:0003824
Bisa09g1196 839 SUPERFAMILY Phospholipase D/nuclease 164 454 - -
Bisa09g1196 839 SMART C2_3c 8 134 IPR000008 -
Bisa09g1196 839 ProSiteProfiles C2 domain profile. 1 135 IPR000008 -
Bisa09g1196 839 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 336 378 IPR001736 GO:0003824
Bisa09g1196 839 FunFam Phospholipase D 481 716 - -
Bisa09g1196 839 Gene3D Endonuclease Chain A 483 709 - -
Bisa09g1196 839 Pfam Phospholipase D C terminal 745 818 IPR024632 -
Bisa09g1196 839 Pfam Phospholipase D Active site motif 671 697 IPR001736 GO:0003824
Bisa09g1196 839 Pfam Phospholipase D Active site motif 336 378 IPR001736 GO:0003824
Bisa09g1196 839 CDD C2_plant_PLD 4 158 - -
Bisa09g1196 839 Gene3D C2 domain 5 203 IPR035892 -
Bisa09g1196 839 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 159 IPR035892 -
Bisa09g1196 839 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 670 697 IPR001736 GO:0003824
Bisa09g1196 839 PANTHER PHOSPHOLIPASE D 4 817 IPR015679 -
Bisa09g1196 839 FunFam Phospholipase D delta 212 457 - -
Bisa09g1196 839 Pfam C2 domain 8 134 IPR000008 -
Bisa09g1196 839 SUPERFAMILY Phospholipase D/nuclease 511 741 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1196 Bisa-ChrBisa09 17202641 17206654 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1196 1 826 Phospholipase D Gene Family (Wang group) AT3G15730 63.571 0.0 1069
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g1196 09 17202641 17206654 Bisa06g2042 06 63932359 63936553 ECH
Bisa09g1196 09 17202641 17206654 Bisa10g1899 10 51540704 51544649 ECH
Bisa09g1196 09 17202641 17206654 Bisa09g1196 09 17202641 17206654 ECH