Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bisa09g1195 | ATGATCTATGTTCATTCAAAGATGATGATAGTTGATGATGAATACATAATCATTGGTTCAGCAAACATAAATCAGAGATCAATGGATGGTGCAAGGGACAGTGAGATTGCAATGGGTGCGTTCCAACCATATCATCTCATTTCCTATGGTCCAGCCAGAGGACAGATATATCGGTTCAGACGGGCATTATGGTATGAGCACCTTGGAGAAACTGATGATGATGATGCCTTTGACCAACCAGAAAGTGATGGTTGTGTCAGGCTCGTGAATAATCTTGCTGACTTGAACTGGAAAGCATACTCAACGCAAAAATTTGATCTAAGTGTTTCATTTCACCACCTCCTTCGCTACCCCATTGCAATATCCGAAAATGGAAATATAACAACACTACCAGGGTTTGAACGCTTTCCTGACACCAAGGCTCCTATTATGGGCAAAAAATCTGAATACTTTCCTCCAATTCTCACAACCTAG | 474 | 0.4114 | MIYVHSKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGAFQPYHLISYGPARGQIYRFRRALWYEHLGETDDDDAFDQPESDGCVRLVNNLADLNWKAYSTQKFDLSVSFHHLLRYPIAISENGNITTLPGFERFPDTKAPIMGKKSEYFPPILTT | 157 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bisa09g1195 | 157 | PANTHER | PHOSPHOLIPASE D | 1 | 146 | IPR015679 | - | |
| Bisa09g1195 | 157 | Pfam | Phospholipase D Active site motif | 1 | 27 | IPR001736 | GO:0003824 | |
| Bisa09g1195 | 157 | SUPERFAMILY | Phospholipase D/nuclease | 2 | 76 | - | - | |
| Bisa09g1195 | 157 | Gene3D | Endonuclease Chain A | 1 | 43 | - | - | |
| Bisa09g1195 | 157 | ProSiteProfiles | Phospholipase D phosphodiesterase active site profile. | 1 | 27 | IPR001736 | GO:0003824 | |
| Bisa09g1195 | 157 | Pfam | Phospholipase D C terminal | 74 | 147 | IPR024632 | - | |
| Bisa09g1195 | 157 | SMART | pld_4 | 1 | 27 | IPR001736 | GO:0003824 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bisa09g1195 | Bisa-ChrBisa09 | 17194346 | 17194900 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bisa09g1195 | 1 | 157 | Phospholipase D Gene Family (Wang group) | AT1G52570 | 65.605 | 1.16e-63 | 206 |