Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1171 ATGGGTACTCTTATGAAGTGCTACAGATCCTTCTTCTCAATGTTACCCTACACATCTCCAACAATTCAGCTCAGAACCAACCACAGTGACTACCCCCTCATTTTTCGGAGGAAGAAGTTGTCTTCGGCTACCCGTTGTTTTAGTGTCATTTCTTCCCAGCCGTCGATTGTCGAGAAGAGCCCCGGGAAATCCGACGGTGAGAGGGTCAAGAGTCCATCGCCGGAGCTGTGGTTGTACAACACGATGAGTAAAAAGGAGGTGTTGTTTAAACCCAAAGTGGAAGGAAAAGTTGGAATGTATGTCTGTGGAGTTACTGCATATGATCTTAGCCATATTGGGCATGCTCGCGCCTACATCAATTTTGACGTTCTTTACAGATATCTTAAGCATTTGGACTTTGAAGTCCGTTATGTTCGCAATTTTACTGATGTAGATGACAAGATAATTGCTAGAGCAAAGGAGTTGGGAGAGGATCCAATCAGTTTGAGCTCGCGTTATTGTGAAGAGTTCAGTCAAGATATGGTAACTCTTAATTGTCTACCTCCTTCTGTGGAACCACGAGTCTCAGAGCACATGCCCCAAATCATTAATATGATTGAGCAGATTATTAATAATGGGTATGCCTACATTGTTGAGGGTGATGTATACTTTAACGTAGAAAAATTCCCAGAATATGGGCAGTTAGCTGGACGAGACCTAGAAGATAATAGAGCTGGTGAGAGGGTTGCTGTTGATTCAAGGAAGAAAAATCCTGCTGATTTTGCTCTTTGGAAGTCTGCAAAGGAGGGAGAGCCATTTTGGGAGAGCCCCTGGGGTCCTGGAAGACCAGGGTGGCATATTGAATGCAGTGCTATGAGTGCAGCTTATCTTGGTTACTCATTTGACATCCATGGTGGAGGGATTGACCTTGTTTTTCCTCACCATGAAAATGAAATTGCTCAGAGTTGTGCTGCTTGTGAGAAAAGTAATATAAGTCTCTGGGTACACAATGGCTATGTAACTGTGAACTCAGTGAAGATGTCCAAGTCGCTAGGAAACTTTGTCACAATACGGCAGGTTGTGGACCTTTACCATCCACTGGCTTTGAGATATTTTTTGATGGGAGCCCATTATCGATCTTCAATCAATTACACCAATATACAGCTTGAAAGTGCTTCAGACCGTGTTTTCTATATATATGAGACTCTAAATGAATGTCAAAGCTTTCTGGACCAACAAGATCTAACTAACAAGGATTCCATCCCACCCGATACTTTGGATATCATTAATAAATTTGATGATGTTTTCGTGGCCTCAATGTCTGATGACCTTCACACCCCGGTTGTACTGGCTGCACTGTCTGACCCACTAAAAGTAATCAATGATCTGCTACATACTCGCAAGGGGAGGAAACAAAAATTGCGAGTCGAATCACTTTTAGCCCTGGAGAGGACTATCAGGAACGTTCTGACTGTTTTAGGACTCATGTCTCCAAGTTATTCTGAGGTTTTGCAGCAGCTGAAGGAAAAGGCTTTAAAACGCGCAAAGTTGACGGAAGATGAAGTCTTGCAGAGAATTGAAGAACGGGCTGCTGCTAGAATAAACAAGGAGTATGAAAAATCAGATGCAATTAGGAATGATCTTGCTCTTTCAGGTATTGCTCTTATGGATAGTCCCAAAGGTACAACGTGGAGGCCTACCATTCCTCTTTCACTTCAGGAGCAGCAGACTGATGCATCTTGA 1722 0.4303 MGTLMKCYRSFFSMLPYTSPTIQLRTNHSDYPLIFRRKKLSSATRCFSVISSQPSIVEKSPGKSDGERVKSPSPELWLYNTMSKKEVLFKPKVEGKVGMYVCGVTAYDLSHIGHARAYINFDVLYRYLKHLDFEVRYVRNFTDVDDKIIARAKELGEDPISLSSRYCEEFSQDMVTLNCLPPSVEPRVSEHMPQIINMIEQIINNGYAYIVEGDVYFNVEKFPEYGQLAGRDLEDNRAGERVAVDSRKKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGYSFDIHGGGIDLVFPHHENEIAQSCAACEKSNISLWVHNGYVTVNSVKMSKSLGNFVTIRQVVDLYHPLALRYFLMGAHYRSSINYTNIQLESASDRVFYIYETLNECQSFLDQQDLTNKDSIPPDTLDIINKFDDVFVASMSDDLHTPVVLAALSDPLKVINDLLHTRKGRKQKLRVESLLALERTIRNVLTVLGLMSPSYSEVLQQLKEKALKRAKLTEDEVLQRIEERAAARINKEYEKSDAIRNDLALSGIALMDSPKGTTWRPTIPLSLQEQQTDAS 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1171 573 Gene3D - 377 559 - -
Bisa09g1171 573 SMART dalr_2_4 428 497 IPR015273 GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423
Bisa09g1171 573 FunFam Cysteine--tRNA ligase CPS1, chloroplastic/mitochondrial 378 559 - -
Bisa09g1171 573 Pfam tRNA synthetases class I (C) catalytic domain 89 385 IPR032678 -
Bisa09g1171 573 SUPERFAMILY Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 415 559 IPR009080 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Bisa09g1171 573 PRINTS Cysteinyl-tRNA synthetase signature 264 282 IPR024909 -
Bisa09g1171 573 PRINTS Cysteinyl-tRNA synthetase signature 99 110 IPR024909 -
Bisa09g1171 573 PRINTS Cysteinyl-tRNA synthetase signature 135 144 IPR024909 -
Bisa09g1171 573 PRINTS Cysteinyl-tRNA synthetase signature 295 316 IPR024909 -
Bisa09g1171 573 Gene3D HUPs 59 376 IPR014729 -
Bisa09g1171 573 PANTHER CYSTEINYL-TRNA SYNTHETASE 70 569 IPR024909 -
Bisa09g1171 573 SUPERFAMILY Nucleotidylyl transferase 75 379 - -
Bisa09g1171 573 CDD CysRS_core 77 378 IPR032678 -
Bisa09g1171 573 Pfam DALR domain 429 490 IPR015273 GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423
Bisa09g1171 573 NCBIfam cysteine--tRNA ligase 76 558 IPR015803 GO:0004817|GO:0005524|GO:0006423
Bisa09g1171 573 Hamap Cysteine--tRNA ligase [cysS]. 76 560 IPR015803 GO:0004817|GO:0005524|GO:0006423
Bisa09g1171 573 FunFam Cysteine--tRNA ligase 75 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1171 Bisa-ChrBisa09 16940073 16945208 Dispersed