Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1169 ATGGGGAAACCCAACGGGAGGAAGAGGGCATTCGCAGACCACAAATCTGGAAATGCGAGCAGTAAGAGCATGAAGCATCCTGACCGTTCCTCTAGATCTTTCGATGAGGACACAACGATGTTCATCAACATGTCTCAGGACCTCAAGGAAGAAGGAAGTAAACTCTATCATAAGAGGGATTACGAAGGCGCAATTCTCAAGTATGAGAAGGCCCTCAAGCTCCTTCCCAGAAACCACATAGACATTGCTCTCCTCCGTAGCTATATGGCTGGCTGTTATATGCATATAGGTCTCGGCGAGTACCCTCAAGCCATCAATGAGTGCAATTTAGCTCTAGAAGTATCACCAAGATATAGTAAGGCTCTGGTGAAACGAGCCAAGTGCTATGGAGAATTGAACCGTTTGGATTTGGCTTTGAGAGATGTTAACACTGTTTTGAGCGTGGAGCCTAATAACCTTGCAGCCTTGGAGATCCTGGAGAATTTGAGAAAGACGGTGGAAGACAAAGGCATGAAATTTGACGAAGAGAAACTTAATGCAGCGCTGGCTCCTGGTTCTCGTTTGCGTAAAGTGGTTCGAGAGAAACTAAGGAAGAAGAAAGGCAAAAAAAATGAGACAGACAAGGCAGAGGATAAGGTGGTTGTTGAGGAGAATGTGGCAAAAACAGTTGATAAGGCAGAAATGCTAGTGGAGCCTGTCAAGGAAGACAAAGGAATAACAAGGACAGCTAAATTGGTGTACGGAGACGATATAAGATGGGTACAGTTACCTGTAAATTGTAGAATGAAGTTGGTAAGGGATATCATTAGGGATCGCTTCCCAGGTTTGAAGGGTTTTCTTGTGAAATACAAGGATCAAGATGGTGATTTGGTTACAATCACTACCACTGATGAGCTAAGATTAGCTGAGTCTTCAGGTCAAGTGCCGGGTTCTGTTCGATTTCATATCACAGAAGTTGATCCACACCACCAACCATCTTATGAAGAGGAGAAGATGAAAGTAGATGGGATTGAGAACAATGGAGCCACAGAAGAAGACGAAGATGCATCAAGTAGAGTGACTTCTGTGGAGGACTGGATTATTCAGTTTGCAAGGCTGTTTAAGAACCGTGTTGGGTTTGATTCTGATTCATATTTGGATCTTCATGAGCTGGGAATGACGCTGTACTCAGAAGCCATGGAGGATACAGTGACAAGTGATGATGCTCAAGACTTGTTTGAGATTGCTGCAGATAAGTTCCAAGAGATGTCAGCTTTGGCAATGTTTAACTGGGGCAATGTTCACATGTGCAAGGCCAGGAAGCAAGCTTCCTTCCCAGAGGAAGGGCCAAGAGAATCTGCTCTTGAACACCTTAGAGCTGCTTATGAGTGGGCACAGAAGGAGTACATGAGAGCAGAAATGAAATATGAAGAAGCCCTGAAAATCAAACCTGACTTCTTTGAAGGCTATCTTGCTCTTGGTCATCAACGTTTTGAGCAAGCAAAGTTATGCTGGTACTATGCAAATGCATGCAAAATGGACTTGGAAGCTGGCCCTGCAGACCAAGTTATTGAGCTCTATAACAAGGCAGAGGACAGCATGGAGAAAGGCATATTCATGTTGGAGCAGATTGAGGAGCAGCGCTTAAATGGAATATCCAAATCCGAAAAGCACAAAGCACGGTTAAACAAGATGGGTTTGGATGGTCTTCTTAATGATGTTTCTTTTGTGGACGCCGCAGAACAGTGTAGAAGCATGACGTCACAAATCAATCTTTTGTGGGGCACCTTATTGTATGAGCGTTCTGTTGTGGAATATAAGCTACATCTACCAACATGGGAAGAATGTTTGGAAGTTTCAGTTGAGAAGTTTGAGCTTGCTGGAGTTTGTCAGACGGATATTGCTGTTATGATAAAAAATCATTGTTCCAACGTCAAATCATCGGAAGGTTGGGGTTTCAAGATTGATGAGTTAGTTCAGGCGTGGAACGAGATGTACGATGCCCAGAGGTGGCAATTTGGAACTCCATCCTTTCGACTTGAGCCATTGTTTCGTCGCCGAGCCCCAAAACTTCATGAAATGTTGGAGCAATTTTAA 2076 0.4388 MGKPNGRKRAFADHKSGNASSKSMKHPDRSSRSFDEDTTMFINMSQDLKEEGSKLYHKRDYEGAILKYEKALKLLPRNHIDIALLRSYMAGCYMHIGLGEYPQAINECNLALEVSPRYSKALVKRAKCYGELNRLDLALRDVNTVLSVEPNNLAALEILENLRKTVEDKGMKFDEEKLNAALAPGSRLRKVVREKLRKKKGKKNETDKAEDKVVVEENVAKTVDKAEMLVEPVKEDKGITRTAKLVYGDDIRWVQLPVNCRMKLVRDIIRDRFPGLKGFLVKYKDQDGDLVTITTTDELRLAESSGQVPGSVRFHITEVDPHHQPSYEEEKMKVDGIENNGATEEDEDASSRVTSVEDWIIQFARLFKNRVGFDSDSYLDLHELGMTLYSEAMEDTVTSDDAQDLFEIAADKFQEMSALAMFNWGNVHMCKARKQASFPEEGPRESALEHLRAAYEWAQKEYMRAEMKYEEALKIKPDFFEGYLALGHQRFEQAKLCWYYANACKMDLEAGPADQVIELYNKAEDSMEKGIFMLEQIEEQRLNGISKSEKHKARLNKMGLDGLLNDVSFVDAAEQCRSMTSQINLLWGTLLYERSVVEYKLHLPTWEECLEVSVEKFELAGVCQTDIAVMIKNHCSNVKSSEGWGFKIDELVQAWNEMYDAQRWQFGTPSFRLEPLFRRRAPKLHEMLEQF 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1169 691 Gene3D Tetratricopeptide repeat domain 42 170 IPR011990 GO:0005515
Bisa09g1169 691 MobiDBLite consensus disorder prediction 1 34 - -
Bisa09g1169 691 Pfam PB1 domain 241 317 IPR000270 GO:0005515
Bisa09g1169 691 PANTHER PROTEIN CLMP1 1 689 IPR044517 -
Bisa09g1169 691 SUPERFAMILY TPR-like 368 493 IPR011990 GO:0005515
Bisa09g1169 691 Gene3D Tetratricopeptide repeat domain 361 551 IPR011990 GO:0005515
Bisa09g1169 691 SMART tpr_5 45 78 IPR019734 GO:0005515
Bisa09g1169 691 SMART tpr_5 83 118 IPR019734 GO:0005515
Bisa09g1169 691 SMART tpr_5 119 152 IPR019734 GO:0005515
Bisa09g1169 691 SMART tpr_5 446 479 IPR019734 GO:0005515
Bisa09g1169 691 SUPERFAMILY CAD & PB1 domains 239 330 - -
Bisa09g1169 691 Coils Coil 192 212 - -
Bisa09g1169 691 Coils Coil 448 468 - -
Bisa09g1169 691 Gene3D - 240 318 - -
Bisa09g1169 691 SUPERFAMILY TPR-like 39 163 IPR011990 GO:0005515
Bisa09g1169 691 ProSiteProfiles PB1 domain profile. 240 319 IPR000270 GO:0005515
Bisa09g1169 691 SMART PB1_new 240 319 IPR000270 GO:0005515
Bisa09g1169 691 ProSiteProfiles TPR repeat profile. 45 78 IPR019734 GO:0005515
Bisa09g1169 691 ProSiteProfiles TPR repeat profile. 119 152 IPR019734 GO:0005515
Bisa09g1169 691 CDD PB1 248 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1169 Bisa-ChrBisa09 16928869 16931018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1169 28 152 Calmodulin-binding Proteins AT3G25230 31.387 2.21e-09 58.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1889 05 36868118 36870328 Bisa09g1169 09 16928869 16931018 CCT