Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1168 ATGTCTTCTCCAAGGAGCAAGAGGCGTCTTCTGTACCATGGCATCCGGTGCCGGAGTGGGAAGTGGGTGTCGAAGATCCGGGAGCCACGCAAGAGTTCGCGCATATGGCTGGGGACGTTCCCCACGGCGGAGATGGCCGGCGGCGATGCCGTCCTCAACTTCTCCGACTGGGCCGACAACTACCCGGTGCCGTTGTCTTCCTCTGCCGCCGACATTCGCACTACCGCCACCGCCGCAGCCTCACTCATGATGTCTCACACACAGACACAAACTCATGACCACAATGCATCAGCGTCATCGGTTTGTAATGTCGCAGGTAACAGTAACGACAACAATGTCGGGGGCTCGGAAACAGAGTTTGTGGACGAGGAAGCCATTTTCGACATGCCCAGTTTGCTCGCGGACATGGCTGAGGGAATGCTTCTTTCACCTCCCAGAATTTTAACAAAACACAACACCAGCAGCAAGGAGAAAGGAGAAAGGAGATTCTATAAGGGTTCGGGCGAGATTTTTGAAGCTGAGAACGCGAACGCTAGGGAGAAAGGAGAAATAGAAGAGACAAAAAAAAATGCCACTGATGATGTGGAAGAAAATACAAGTCAGCATTTAAATTTGAGACACTGA 624 0.5224 MSSPRSKRRLLYHGIRCRSGKWVSKIREPRKSSRIWLGTFPTAEMAGGDAVLNFSDWADNYPVPLSSSAADIRTTATAAASLMMSHTQTQTHDHNASASSVCNVAGNSNDNNVGGSETEFVDEEAIFDMPSLLADMAEGMLLSPPRILTKHNTSSKEKGERRFYKGSGEIFEAENANAREKGEIEETKKNATDDVEENTSQHLNLRH 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1168 207 SUPERFAMILY DNA-binding domain 12 55 IPR016177 GO:0003677
Bisa09g1168 207 MobiDBLite consensus disorder prediction 150 207 - -
Bisa09g1168 207 Coils Coil 170 190 - -
Bisa09g1168 207 ProSiteProfiles AP2/ERF domain profile. 11 46 IPR001471 GO:0003700|GO:0006355
Bisa09g1168 207 MobiDBLite consensus disorder prediction 151 207 - -
Bisa09g1168 207 CDD AP2 12 56 IPR001471 GO:0003700|GO:0006355
Bisa09g1168 207 Gene3D AP2/ERF domain 11 61 IPR036955 GO:0003700|GO:0006355
Bisa09g1168 207 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 5 152 IPR045277 GO:0003700
Bisa09g1168 207 SMART rav1_2 11 63 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1168 Bisa-ChrBisa09 16927389 16928012 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1168 11 148 AP2-EREBP Transcription Factor Family AT5G52020 44.667 6.91e-36 124