Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1160 ATGAATCGAGCGCTACAGAGTCACGCAATTGTGAAAAGCCTATTAAAAGTTTGGAATATTGAAATAGAAGGCCTGCATAAGCATATAACTCCACACAAAATGTTTGAAAAGGAAATGAGCATCATTCATTCCACAAAATCTGCACCTGAAGGTGACCAAAATTGTGTATCAAGGCCAGAAAATATTGAGCCATCAACTACAGATCTGAGGAAAGTTGAGATGTCTAGCAGTCAAATGCAACAAACTCCATACTCTAATGGTAATTTTAGTGTATGCAACAGTATAACAGCAGGAGTACTTGATTCAACTGTTAAGCAGTGGGTTCACATGGTTTGTGGGCTTTGGACTCCTGGAACACGATGCCCCAATGTTGACACCATGAGTGCTTTTGATGTATCTGGCGTTTCCCGTCCAAAAGCTGATACGGTTTGTTCCATTTGTAATCGATGGGGTGGCTCTTGTATAAAATGTAGGATTGTTGATTGCTCTGTCCAATTTCATCCTTGGTGTGCTCATCAGAAGTATTCTGGAAGCATATTGATGAATCTGTTGCAAAATGAGGCTGAAGGTGTTGATGATGAAAAGGTGGGATTTTATGGAAGATGTGTGCTTCATGCTGACGACTCTATATGTCAGGCCAAACATGATCTTATTGGGAACGAGATGGCCTGTCCAGAGAGAATGCAATCAAGCTGTGCAAGGACAGAGGGTTACAAGGGGCGTAGGAGGGATGGATTTCAGCATAATCATTATGATGTGTTAAAAGGCAAGGGTGGATGCCTCGTTCCTCAGGAGCAGTTAAATGCTTGGATTCACATTAATGGGCAGAAGTTTTATTCACAGGGACTCCCAAAATTTCCTGCATCAGATGTTGAATATGATTGCAGGAAGGAATATGCTCGGTACAAACAAGCAAAGGGTTGGAAACACCTTGTTGTTTACAAGTCTGGCATACATGCCCTTGGGCTTTACACTTCTCGGTTCATTTCCCGGGGTGAAATGGTTGTTGAGTATGTTGGTGAGATTGTGGGCCTACGTGTAGCTGATAAAAGAGAAATTGAATATCAATCTGGGAGAAAACTACAGTACAAGAGCGCCTGCTACTTCTTTAGGATAGACAAAGAGCATATTATTGATGCCACACGAAAAGGGGGGATTGCTCGTTTTGTTAATCACTCATGCTTGCCAAATTGCGTGGCTAAAGTGATAACTATAAGGCATGAAAAGAAGGTTGTCTTCTTTGCGGAGAGGGACATATTTCCCGGTGAAGAGATAACATACGATTACCACTTCAACCACGAAGATGAAGGACAGAAGATTCCTTGTTACTGCAACTCGAAAAACTGCAGGCGCTATCTGAACTGA 1365 0.4205 MNRALQSHAIVKSLLKVWNIEIEGLHKHITPHKMFEKEMSIIHSTKSAPEGDQNCVSRPENIEPSTTDLRKVEMSSSQMQQTPYSNGNFSVCNSITAGVLDSTVKQWVHMVCGLWTPGTRCPNVDTMSAFDVSGVSRPKADTVCSICNRWGGSCIKCRIVDCSVQFHPWCAHQKYSGSILMNLLQNEAEGVDDEKVGFYGRCVLHADDSICQAKHDLIGNEMACPERMQSSCARTEGYKGRRRDGFQHNHYDVLKGKGGCLVPQEQLNAWIHINGQKFYSQGLPKFPASDVEYDCRKEYARYKQAKGWKHLVVYKSGIHALGLYTSRFISRGEMVVEYVGEIVGLRVADKREIEYQSGRKLQYKSACYFFRIDKEHIIDATRKGGIARFVNHSCLPNCVAKVITIRHEKKVVFFAERDIFPGEEITYDYHFNHEDEGQKIPCYCNSKNCRRYLN 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1160 454 FunFam Histone-lysine N-methyltransferase 218 454 - -
Bisa09g1160 454 PANTHER HISTONE-LYSINE-N-METHYLTRANSFERASE 2 KMT2 FAMILY MEMBER 44 454 - -
Bisa09g1160 454 ProSiteProfiles SET domain profile. 309 430 IPR001214 GO:0005515
Bisa09g1160 454 SMART set_7 309 436 IPR001214 GO:0005515
Bisa09g1160 454 SUPERFAMILY SET domain 297 450 IPR046341 -
Bisa09g1160 454 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 85 205 IPR013083 -
Bisa09g1160 454 SMART PostSET_3 438 454 IPR003616 -
Bisa09g1160 454 ProSiteProfiles Extended PHD (ePHD) domain profile. 52 206 IPR034732 -
Bisa09g1160 454 CDD ePHD 106 174 - -
Bisa09g1160 454 Pfam PHD-zinc-finger like domain 91 174 - -
Bisa09g1160 454 ProSiteProfiles Post-SET domain profile. 438 454 IPR003616 -
Bisa09g1160 454 CDD SET_SETD1-like 311 450 - -
Bisa09g1160 454 Gene3D SET domain 206 454 IPR046341 -
Bisa09g1160 454 Pfam SET domain 322 429 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1160 Bisa-ChrBisa09 16837275 16841531 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1160 311 454 C2H2 Transcription Factor Family AT2G23740 32.927 2.08e-16 80.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bisa09g1160 SET 7.4e-18 No_clan