Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1152 ATGAAAATGAGGCTCCTTCTTCTGCTCGCTATGCTGCTTCCTTTTCTTCCAGAACGTGCTGCAGCTGACCCGATTGTTTCCTCTCCTCAAACCTCACCATTGTCTGAGTCTCCCACATCCATGGCTGCTCCTGCTTTCTCCCCAGGTATCCAGGTGAGGGATGAACAGAACCGAACGGATTTAAACAAGAAAATGTTCATAGCTCTGGTGGTAGCCAGCACTGCACTTGGTGTAGTCATTTTGTCTTTGTTATGCTTCTGGGTTTATTACAGGAAGCATCCCTCCAAATCCAACAGAAAAAATTTAGAGAGCTCAGATGCTGAGAAAGGGGTTGCGTTAGCTCCATTTCTGAGTAAATTCAGTTCTCTCAAGATGGCTGGTAAGAAGGGGTCTGTTCTTATAATGGATTGTAAGAAATTAGAAAAAGCGACAAACGATTTTCTGGAAAATAACATCTTGGGTGAGGGCGGATTTGGACGTGTTTACAAGGGACGATTGGATGATAATAACTTGGATGTTGCCGTCAAGAAATTGCACTGTGAAAGTCCAGACGCTGAGAGAGAATTTGAGAACGAGGTGGATTTGTTAAGTAAAATTCAGCATCCAAATATAATTTCTTTGCTGGGTTGTAGCATTGATGTCGACACGAGGTTTATTGTCTATGAATTGATGCAAAATGGATCCCTGGAAACTCAATTACATGGACCTTCTCATGGCTCGGCATTGACTTGGCACATGAGGATGAAAATTGCTCTCGATGTAGCAAGAGGATTAGAATATCTGCATGAAAGCTGTAACCCTCCAGTGATCCATAGAGATCTGAAATCGTCTAATATTCTATTAGATGTAAATTTCAACGCCAAGCTTTCTGATTTTGGTCTTGCCATAGCTGATGGGTCCCAAGAGAAGAATAACATAAAACTCTCAGGCACATTGGGCTATGTAGCCCCAGAGTATTTATTAGATGGGAAATTAACTGATAAAAGCGATGTGTACGCTTTTGGAGTAGTGCTTTTAGAGCTTCTATTAGGGAGGAAGGCTGTGGAAATACTAGCACCAGCACACTGCCAATCCATTGTCACATGGGCCATGCCACACCTCACCGACAGATCCAAGCTTCCAAACATTTTGGATCCCGTGATTAAGAATACAATGGATCCAAAGCATTTATACCAGGTTGCTGCTGTAGCTGTGCTATGCGTGCAACCAGAACCTAGTTATCGTCCACTAATTGCAGATGTTCTGCACTCAATGATCCCTCTTATTCCCATTGAGCTTGGAGGAACACTCAGAATTTCCCAAGTGACGCAGCCTCCCTTACCTCCTCAATCTCTACCTTATTCACCTCATTGA 1353 0.4316 MKMRLLLLLAMLLPFLPERAAADPIVSSPQTSPLSESPTSMAAPAFSPGIQVRDEQNRTDLNKKMFIALVVASTALGVVILSLLCFWVYYRKHPSKSNRKNLESSDAEKGVALAPFLSKFSSLKMAGKKGSVLIMDCKKLEKATNDFLENNILGEGGFGRVYKGRLDDNNLDVAVKKLHCESPDAEREFENEVDLLSKIQHPNIISLLGCSIDVDTRFIVYELMQNGSLETQLHGPSHGSALTWHMRMKIALDVARGLEYLHESCNPPVIHRDLKSSNILLDVNFNAKLSDFGLAIADGSQEKNNIKLSGTLGYVAPEYLLDGKLTDKSDVYAFGVVLLELLLGRKAVEILAPAHCQSIVTWAMPHLTDRSKLPNILDPVIKNTMDPKHLYQVAAVAVLCVQPEPSYRPLIADVLHSMIPLIPIELGGTLRISQVTQPPLPPQSLPYSPH 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1152 450 CDD STKc_IRAK 153 421 - -
Bisa09g1152 450 Gene3D Phosphorylase Kinase; domain 1 113 223 - -
Bisa09g1152 450 SMART serkin_6 147 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g1152 450 ProSitePatterns Protein kinases ATP-binding region signature. 153 177 IPR017441 GO:0005524
Bisa09g1152 450 SUPERFAMILY Protein kinase-like (PK-like) 130 417 IPR011009 -
Bisa09g1152 450 PANTHER OS01G0750732 PROTEIN 35 417 - -
Bisa09g1152 450 ProSiteProfiles Protein kinase domain profile. 147 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g1152 450 FunFam Protein kinase superfamily protein 114 223 - -
Bisa09g1152 450 Pfam Protein tyrosine and serine/threonine kinase 151 415 IPR001245 GO:0004672|GO:0006468
Bisa09g1152 450 FunFam probable receptor-like protein kinase At1g80640 224 423 - -
Bisa09g1152 450 Gene3D Transferase(Phosphotransferase) domain 1 224 422 - -
Bisa09g1152 450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 269 281 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1152 Bisa-ChrBisa09 16744590 16748308 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1152 3 364 Receptor kinase-like Gene Family AT1G80640 48.387 9.36e-99 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Bisa09g1152 PK_Tyr_Ser-Thr 1.2e-47 CL0016