Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1150 ATGACAGATGGGCCAGAGAAGAACTATTACAAACCCCATTGGCCCAGGCTTGATCCATTAAAGGAAAGACTGGACACTAGGGTTTGTTTTGTGAGGGCGTCTGCACTTAGGTTGTCAGTGGCGCAGTCGAACTCCGTCGAAGAAGAAGAAGCGAAAATGCCGTCCCACAAGACCTTCAGAATCAAGAAGAAGTTGGCGAAGAAGATGAGGCAGAACAGGCCCATCCCATACTGGATCCGCATGAGGACTGACAACACCATCAGGTACAACGCCAAGCGCCGCCACTGGCGTCGCACCAAGCTTGGATTTTGA 312 0.5128 MTDGPEKNYYKPHWPRLDPLKERLDTRVCFVRASALRLSVAQSNSVEEEEAKMPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1150 103 FunFam 60S ribosomal protein-like L39 53 103 - -
Bisa09g1150 103 Hamap 50S ribosomal protein L39e [rpl39e]. 53 103 IPR000077 GO:0003735|GO:0005840|GO:0006412
Bisa09g1150 103 ProSitePatterns Ribosomal protein L39e signature. 82 98 IPR020083 GO:0003735|GO:0005840|GO:0006412
Bisa09g1150 103 Gene3D Ribosomal protein L39e 53 103 IPR023626 -
Bisa09g1150 103 SUPERFAMILY Ribosomal protein L39e 55 102 IPR023626 -
Bisa09g1150 103 Pfam Ribosomal L39 protein 61 101 IPR000077 GO:0003735|GO:0005840|GO:0006412
Bisa09g1150 103 PANTHER RIBOSOMAL PROTEIN L39E 45 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1150 Bisa-ChrBisa09 16733422 16736223 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1150 53 103 Cytoplasmic Ribosomal Protein Gene Family AT4G31985 90.196 1.84e-29 98.6