Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1149 ATGGCCAGACCACAACAGCGGTATCGAGGCGTCCGACAAAGGCATTGGGGCTCTTGGGTCTCTGAGATTCGCCACCCTCTCTTGAAGACGAGGATATGGCTGGGCACGTTTGAAACGGCTGAAGACGCAGCCAGAGCCTACGACGAAGCAGCGAGGCTGATGTGTGGTCCGAGGGCCAGAACCAATTTCCCTTACAACCCCAATGAATCTTCGTCTTCGTCTTCGAAGCTTCTCTCTGCAACTCTAACTGCTAAACTCCATAGGTGCTACATGGCTTCTCTGCAAATGACAACAAGGTCCTCTTTACCAGAGCCTCAAAGTCAAAGAGCGACATCAACATCACCAAATGTTGTGTCCACAAGCACAAGCAGCTCGTCCTCTGTGAAGAGCAGTCAAACCCATGTGACAATGTTGGGACAGAAGAGAACAAAGGAGGAAGAAGAGGAAGAATCAGAGGCGATGTGGGTGGTGAAGAAGGTGAAAGTGGAGAGTGGGGAGCAGTTCATGCCTCTTGAAGAGGATCATATAGAGCAAATGATTGAGGAGCTTCTTGATTATGGGTCTATTGAACTCTGTTCTGGTCATGCCTCCTATCAGTAA 600 0.4967 MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPYNPNESSSSSSKLLSATLTAKLHRCYMASLQMTTRSSLPEPQSQRATSTSPNVVSTSTSSSSSVKSSQTHVTMLGQKRTKEEEEEESEAMWVVKKVKVESGEQFMPLEEDHIEQMIEELLDYGSIELCSGHASYQ 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1149 199 ProSiteProfiles AP2/ERF domain profile. 7 64 IPR001471 GO:0003700|GO:0006355
Bisa09g1149 199 Gene3D AP2/ERF domain 6 65 IPR036955 GO:0003700|GO:0006355
Bisa09g1149 199 PRINTS Ethylene responsive element binding protein signature 8 19 IPR001471 GO:0003700|GO:0006355
Bisa09g1149 199 PRINTS Ethylene responsive element binding protein signature 30 46 IPR001471 GO:0003700|GO:0006355
Bisa09g1149 199 MobiDBLite consensus disorder prediction 97 138 - -
Bisa09g1149 199 CDD AP2 6 66 IPR001471 GO:0003700|GO:0006355
Bisa09g1149 199 Pfam AP2 domain 7 56 IPR001471 GO:0003700|GO:0006355
Bisa09g1149 199 SUPERFAMILY DNA-binding domain 7 66 IPR016177 GO:0003677
Bisa09g1149 199 SMART rav1_2 7 70 IPR001471 GO:0003700|GO:0006355
Bisa09g1149 199 FunFam Ethylene-responsive transcription factor 2 6 65 - -
Bisa09g1149 199 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 6 141 - -
Bisa09g1149 199 MobiDBLite consensus disorder prediction 97 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1149 Bisa-ChrBisa09 16726721 16727418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1149 1 193 AP2-EREBP Transcription Factor Family AT5G25190 64.767 3.52e-79 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa09g1149 AP2 8.7e-12 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g1149 09 16726721 16727418 Bisa09g1149 09 16726721 16727418 ECH