Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1143 ATGACGGTAGAGACCAGAATGGAGGATCCTAGAGACCAGTTTCCCATAGGAATGCGTGTTCTTGCCGTTGACGATGACCCAACTTGCCTCTTGGTGTTGGAAACTCTTCTTCGAAGATGCCAATATCACGTAACGACAACAAGCCAGGCAATAACAGCACTGAAGTTGTTGAGAGAAAACAAAAACAATTTTGACCTCGTTATCAGTGATGTTCATATGCCAGACATGGATGGATTTAAGCTCCTTGAGCTTGTTGGGCTCGAGATGGACTTACCTGTCATAATGTTGTCAGCATATGGTGACACAAAGCTGGTGATGAAGGGAATTACTCACGGAGCATGCGATTATCTGTTGAAACCTGTTCGAATTGAGGAGCTAAAGAACATTTGGCAGCACGTAATCAGGAGGAAGAAGTTTGACTCGAAGGAACAGAACAATGCCAACAACCAAAATAATCCTCATTCCGGTGGTGACAATGGACTTGTGTCAGCAGGAACAAGCAATGTAGATCAAAAGACGACCAAGAAACGGAAGGATCAGGATGAGGAGGAAGACGAGGACCGTGAAAATGGTAATGACAGTGAAGACCCGGCAACCCAAAAGAAGCCTCGGGTTGTTTGGACAGTGGAGCTGCACCGCAAGTTTGTAGCTGCTGTTAATCATTTAGGCATTGACAAGGCTGTACCTAAAAAGATTCTTGATTTAATGAATGTTGAAAAGCTTACTAGGGAGAATGTGGCAAGCCATCTCCAGAAATATCGGCTTTATCTGAAAAGAATTAGCTGTGTGGCAAACCAGCAAGCTAATATGGTGGCAGTGTTAGGTACTGCAGATCAATCCTATCTGAGAATGAATTCTCTGGGTGGTCTCAGACATTTGCAAACATTGAGTGGCTCTGCACAGTTTCAAAACAATGTTCTAAGATCCTTCCCACCCAGTGGGGTGATCGGCCGATTGAACACTCCTGCTGGTCTGGGTGTGCATGGATTGCCTTCATCAATAAACTTTCAGTTGGGTCATGCACAAAATCTAAACAATTCCATGAATGATCCACTTAAGTTCCAGTGTACCACTGTTCATGGTAATCAAAATGGTGGTGCAGTTCAAGGAATGCCAGTATCTACACGGCCTGATGAATTACATTTGCAGCACCAGAAGGGCGTTAGTTCTGTCCAAAACCTGACCAATGGTGTTGATAATGAAACGATTTTACCAGTGTCGAGTGAGCCACCTGATCCAGCACAAAGAGCAACCACCAGTTGCTCAGGTACTCTGCATCAGGGTGTCAGAAACAGCAACTTGATGGTGGTAACACATCCCCAGAACACACAAGTGGGTGTAACATATGAGAATCTATCTTCAGTAGACTCTCAACGTGCAGGATTTTCTTCGTCTTCGCTGGATCATGGTAGATGTAGTAATAATTGGTCAAATGCTGTGCAGTCATCGGGAATCCAGCCAAATTCTTTCCCACCAAGTGGACAAATTTCTATACCACCTACTGATAAATTGACTTCTAATACGAGTGGCTCTTCATCCACTGCTTTACTGTCCGATCAATCCTGTGATTTAATTGCAGATACGCATTCCCAAGGAGCCATTTTTTCCAGTGTACCTGGGCACATAAGCAGTAATGTGCCATTTCTAGGGTGGGAAGACCGAAATCAGGATGCTGCATACCATTCAAATGTTATTTGTAGCTCAGTGAACTCTCTGGTTCCTGTAAATGGTGCTGGTGTTGGTCCAGCGGGCCATTCTTCAACAGACTCAGCCTTCTACAGAAACTTCGACTTCAATTTTGGTGATCCCATACGAATGAAGGACGATGGGGTCACAAAATTGACGGAAGAGATCTCATTGAATATCATGGACCAGCACAAGGCTCAACAGAGTTGTATCTCTAACAACCTTGGTTCATTGGAAGACTTGGTTAGTTCAATGATGAAACAGGATCATCAAGACAAGGCGAAATTACTGGATGGAGACTTCATATGCAACAATTACTTTACTGGGACATCTCTGTGA 2025 0.44 MTVETRMEDPRDQFPIGMRVLAVDDDPTCLLVLETLLRRCQYHVTTTSQAITALKLLRENKNNFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKFDSKEQNNANNQNNPHSGGDNGLVSAGTSNVDQKTTKKRKDQDEEEDEDRENGNDSEDPATQKKPRVVWTVELHRKFVAAVNHLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVAVLGTADQSYLRMNSLGGLRHLQTLSGSAQFQNNVLRSFPPSGVIGRLNTPAGLGVHGLPSSINFQLGHAQNLNNSMNDPLKFQCTTVHGNQNGGAVQGMPVSTRPDELHLQHQKGVSSVQNLTNGVDNETILPVSSEPPDPAQRATTSCSGTLHQGVRNSNLMVVTHPQNTQVGVTYENLSSVDSQRAGFSSSSLDHGRCSNNWSNAVQSSGIQPNSFPPSGQISIPPTDKLTSNTSGSSSTALLSDQSCDLIADTHSQGAIFSSVPGHISSNVPFLGWEDRNQDAAYHSNVICSSVNSLVPVNGAGVGPAGHSSTDSAFYRNFDFNFGDPIRMKDDGVTKLTEEISLNIMDQHKAQQSCISNNLGSLEDLVSSMMKQDHQDKAKLLDGDFICNNYFTGTSL 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1143 674 NCBIfam myb-like DNA-binding domain, SHAQKYF class 202 255 IPR006447 GO:0003677
Bisa09g1143 674 FunFam Two-component response regulator 198 261 - -
Bisa09g1143 674 Pfam Response regulator receiver domain 20 128 IPR001789 GO:0000160
Bisa09g1143 674 Gene3D - 198 261 - -
Bisa09g1143 674 CDD REC_typeB_ARR-like 20 134 - -
Bisa09g1143 674 PIRSF RR_ARR_type-B 1 672 IPR017053 GO:0003677|GO:0003700|GO:0009736
Bisa09g1143 674 PANTHER TWO-COMPONENT RESPONSE REGULATOR 18 359 IPR045279 GO:0009736
Bisa09g1143 674 SUPERFAMILY CheY-like 17 142 IPR011006 -
Bisa09g1143 674 ProSiteProfiles Response regulatory domain profile. 19 134 IPR001789 GO:0000160
Bisa09g1143 674 MobiDBLite consensus disorder prediction 478 512 - -
Bisa09g1143 674 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 199 258 IPR017930 -
Bisa09g1143 674 Gene3D - 17 155 - -
Bisa09g1143 674 MobiDBLite consensus disorder prediction 401 420 - -
Bisa09g1143 674 MobiDBLite consensus disorder prediction 144 170 - -
Bisa09g1143 674 SUPERFAMILY Homeodomain-like 199 259 IPR009057 -
Bisa09g1143 674 SMART REC_2 18 130 IPR001789 GO:0000160
Bisa09g1143 674 Pfam Myb-like DNA-binding domain 204 254 IPR001005 -
Bisa09g1143 674 MobiDBLite consensus disorder prediction 140 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1143 Bisa-ChrBisa09 16675215 16678625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1143 1 663 Response Regulator Gene Family AT2G25180 42.774 2.51e-137 413
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Bisa09g1143 Response_reg 5.8e-23 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1868 05 35499261 35502678 Bisa09g1143 09 16675215 16678625 CCT
Bisa09g1143 09 16675215 16678625 Bisa09g1143 09 16675215 16678625 ECH