Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1131 ATGGACGAAGATCAAATACTGGGATTCGTCACTGCGTACCTCAAGAAGAAAGGGTTTACGCAAACTGAGCACGCGTTCCAGGAAGAACTTCAACAGAACAAGAACAGTTCTTCTGCTAATTCCATTGTCGAACCCGACATTGCCAAGCACATCCTTGCCTTTTCCGAGTTAGAGAGTGGCCCGGCAAGATTCTATGATGGGTATAGCAGACTCAGATCTTGGGCATACAGTTCACTAGATTTGTACAAGCATGAATTACTTCGTGTGCTTTATCCAGTATTTATCCACTGTTTTATGGATCTTGTGGCAAAAGGGCATATTCAAGAAGCTCGGAACTTTTTCAATAGCTTCCGTGAAGACCATGAAATGATGCACTTACGAGACCTTCAGAAGTTGGAAGGTGTTCTTTCTCCTTCTCATTTGGAGGAAATGGAATTTGCTCATTCCCTCAGGCGGAGCAAATTCAACATAAAGATATGTGGGTATTCGTATGAGCTTCTGTTGCAACATCTACACAGTACACAATCTACCACTATACTTGGTATTATCAATGAGCATATTAACTTCCAAGTTACTCCTGGACAGCCTAACTCAATTTCTGATGACCCAGAGGCTATTACCCTCACTGGAAGTAGCCAGGATGCAGCAAACCAGATAAATCAGAAAGAAATACATTGGGGGTTGCTTGAAGACTCTCTAGAGGAACGCCTTGAGAAGGCTGGGGCCTTGCTTTCTGACTCTGAAAAGGGGGAAGGGGAAGCAAAAGAAGGGGAGAACGATGAGAGTAAGAAAAGATCAATTGAAGGAGGAAAGCAAGGTGCCTCTGTCAAGAAAGTGAAAAAGGACAAGGGTGGAAGTACAACAGGGAAGAGTGCAAAACCTGAAGCCAACACTGCAGCGGCAGCACCACGTGTTAAACCAGAACTTGCCTTACCCATAATTCCAACGGAGGTAGAACAATCCATCCTTGAAGACTTGAGGAGCCGTGTACAATTGAGTAGTGTTGCACTGCCTTCAGTCAGCTTTTATACGTTTCTCAATACACATAATGGGTTAAGCTGTTCATCAATATCCCAAGATGGATCATTGGTCGCTGGAGGATTTTCTGACTCATCAATGAAGGTTTGGGATATGGCAAAGCTTGGACAACAGCTCAACAATTCTCAATCGCAAGGTGAGAATGAGACATCACAAAATGAACAAATACTTGGGCAAAGTGGCGGGAGAAGACAGTATACATTATTTCAAGGTCATTCAGGGCCAGTTTATGCTGCCACTTTTAGTCCTGTTGGGGATTTTATTCTTTCCTCTTCAGCCGACTCAACAATTAGATTATGGAACACAAAGCTTAATGCCAATCTTGTTTGCTACAAAGGTCACAATTACCCTGTCTGGGATGTCCAGTTTTTGGCCAGTGCATTCCTCTTATTTTGTCTACTACTACCTTGGGGAACTGATGCCTTGGATATTGTTGGATACAAGATGAAAAATTTAGCATTTTAA 1503 0.4291 MDEDQILGFVTAYLKKKGFTQTEHAFQEELQQNKNSSSANSIVEPDIAKHILAFSELESGPARFYDGYSRLRSWAYSSLDLYKHELLRVLYPVFIHCFMDLVAKGHIQEARNFFNSFREDHEMMHLRDLQKLEGVLSPSHLEEMEFAHSLRRSKFNIKICGYSYELLLQHLHSTQSTTILGIINEHINFQVTPGQPNSISDDPEAITLTGSSQDAANQINQKEIHWGLLEDSLEERLEKAGALLSDSEKGEGEAKEGENDESKKRSIEGGKQGASVKKVKKDKGGSTTGKSAKPEANTAAAAPRVKPELALPIIPTEVEQSILEDLRSRVQLSSVALPSVSFYTFLNTHNGLSCSSISQDGSLVAGGFSDSSMKVWDMAKLGQQLNNSQSQGENETSQNEQILGQSGGRRQYTLFQGHSGPVYAATFSPVGDFILSSSADSTIRLWNTKLNANLVCYKGHNYPVWDVQFLASAFLLFCLLLPWGTDALDIVGYKMKNLAF 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1131 500 MobiDBLite consensus disorder prediction 242 288 - -
Bisa09g1131 500 ProSiteProfiles Trp-Asp (WD) repeats profile. 415 447 IPR001680 GO:0005515
Bisa09g1131 500 Pfam WD40 associated region in TFIID subunit, NTD2 domain 59 187 IPR007582 -
Bisa09g1131 500 SUPERFAMILY WD40 repeat-like 339 472 IPR036322 GO:0005515
Bisa09g1131 500 SMART WD40_4 338 377 IPR001680 GO:0005515
Bisa09g1131 500 SMART WD40_4 408 447 IPR001680 GO:0005515
Bisa09g1131 500 MobiDBLite consensus disorder prediction 242 303 - -
Bisa09g1131 500 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 2 469 - -
Bisa09g1131 500 CDD TAF5_NTD2 61 193 IPR007582 -
Bisa09g1131 500 ProSitePatterns Trp-Asp (WD) repeats signature. 364 378 IPR019775 -
Bisa09g1131 500 SUPERFAMILY Taf5 N-terminal domain-like 50 192 IPR037264 -
Bisa09g1131 500 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 415 447 - -
Bisa09g1131 500 ProSiteProfiles LIS1 homology (LisH) motif profile. 2 34 IPR006594 GO:0005515
Bisa09g1131 500 Gene3D - 217 478 IPR015943 GO:0005515
Bisa09g1131 500 Pfam WD domain, G-beta repeat 413 447 IPR001680 GO:0005515
Bisa09g1131 500 Pfam WD domain, G-beta repeat 346 377 IPR001680 GO:0005515
Bisa09g1131 500 Gene3D TFIID subunit TAF5, NTD2 domain 41 192 IPR037264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1131 Bisa-ChrBisa09 16437128 16444990 Dispersed