Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1130 ATGGAGGACAAAAACACTCTGTTTGGGAAATACGAAATAGGCAGGCTTCTGGGGAAAGGGACGTTCGCGAAAGTGTATTACGGGAAACACATAGGGAGCGGCGAAAGCGTGGCGATCAAAGTGCTGAGCAAAGAGCAAGTGAAGAAGGAGGGGATGATGGAGCAGATCAAGCGTGAGATTTCCGTGATGCGACTGGTTCGTCACCCCAACGTGGTGGAGTTCAAAGAAGTCATGGCCACCAAAACTAAGATCTTCTTCGTGATGGAGTACGTGCGTGGCGGTGAGCTGTTCGCCAAGGTCGCGAAGGGCAAGCTCAAGGAAGATATCGCACGGAAGTATTTCCAACAGTTAATCAGCGCCGTCGATTTCTGCCACAGCAGGGGCGTATCGCACCGCGACCTCAAGCCCGAGAATCTACTCCTCGACGAGAACGAGAATCTCAAGATCTCCGATTTCGGGCTCTCGGCGTTGCCGGAGCAGCTCCGGTACGACGGCCTCCTCCACACCCAGTGTGGGACTCCGGCGTATGTCGCCCCTGAAGTGTTGAGGAAGAAAGGGTACAATGGGTCCAAGGCTGATATCTGGTCTTGTGGTGTGATTCTGTACGTATTGCTGGCCGGGTTTCTTCCTTTCCAAAACGAGAATCTCATGAGTATGTATAACAAGGTTTTGAAAGCCGAATTCCAGTTTCCCCCATGGTTTTCTCCGGAATCGCGGAGATTGATTTCGAAAATCCTCGTGGCGGACCCAGAGAAGCGAACCACAATTCCTGCTATAATGCGGGTCCCGTGGTTTCAAAAGGGGTTCTCGAGGCCATCCGCGTTTGAATTACAAGATCCCGTTCAGGAAAAAACTGATGAGATCAATTCCAAAACGAAGCCCACATCGCCCAAGTTCTTCAACGCCTTCGAGTTCATATCGTCCATGTCTTCCGGGTTCGATTTGTCGGGTTTGTTCGAGAAATGCAGGAAAACCAGGTCGGTGTTCACGTCCAAGTGTTCCGCCACGGCAATCGTGTCGAAGATTGAGACGGTGGCGAAGGGGATGAGTTTCAAGGTGGCGAATGAGAAGGGCTTCAAAATCAGGCTGCAGGGGCCGTCGGAGGGAAGAAAGGGGAAGTTGTATGTGACGGCGGAGGTGTTCGAGGTGGCACCGGAGGTCGCCGTCGTGGAGTTTTGCAAGTGTTCCGGCGACACGCTGGAATATGCCAAGTTTTGCGAGGAAGACGTTAGGCCGGCGCTGAAAGACATTGTTTGGACGTGGCAAGGTGACAGGGCGTGTAACGGTAACATCGCTAGCGGTTACGGAGAAGAATGTCGGGGATGA 1326 0.5271 MEDKNTLFGKYEIGRLLGKGTFAKVYYGKHIGSGESVAIKVLSKEQVKKEGMMEQIKREISVMRLVRHPNVVEFKEVMATKTKIFFVMEYVRGGELFAKVAKGKLKEDIARKYFQQLISAVDFCHSRGVSHRDLKPENLLLDENENLKISDFGLSALPEQLRYDGLLHTQCGTPAYVAPEVLRKKGYNGSKADIWSCGVILYVLLAGFLPFQNENLMSMYNKVLKAEFQFPPWFSPESRRLISKILVADPEKRTTIPAIMRVPWFQKGFSRPSAFELQDPVQEKTDEINSKTKPTSPKFFNAFEFISSMSSGFDLSGLFEKCRKTRSVFTSKCSATAIVSKIETVAKGMSFKVANEKGFKIRLQGPSEGRKGKLYVTAEVFEVAPEVAVVEFCKCSGDTLEYAKFCEEDVRPALKDIVWTWQGDRACNGNIASGYGEECRG 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1130 441 FunFam Non-specific serine/threonine protein kinase 295 419 - -
Bisa09g1130 441 SMART serkin_6 11 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g1130 441 SUPERFAMILY Protein kinase-like (PK-like) 8 305 IPR011009 -
Bisa09g1130 441 ProSiteProfiles Protein kinase domain profile. 11 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g1130 441 Pfam NAF domain 297 354 IPR004041 GO:0007165
Bisa09g1130 441 FunFam Non-specific serine/threonine protein kinase 2 90 - -
Bisa09g1130 441 FunFam Non-specific serine/threonine protein kinase 4 299 - -
Bisa09g1130 441 Pfam Protein kinase domain 11 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g1130 441 ProSitePatterns Protein kinases ATP-binding region signature. 17 40 IPR017441 GO:0005524
Bisa09g1130 441 ProSiteProfiles NAF domain profile. 295 320 IPR018451 GO:0007165
Bisa09g1130 441 CDD STKc_SnRK3 10 264 - -
Bisa09g1130 441 Gene3D Phosphorylase Kinase; domain 1 1 90 - -
Bisa09g1130 441 Gene3D Kinase associated domain 1, KA1 295 420 - -
Bisa09g1130 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Bisa09g1130 441 Gene3D Transferase(Phosphotransferase) domain 1 91 271 - -
Bisa09g1130 441 CDD CIPK_C 301 415 - -
Bisa09g1130 441 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 4 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1130 Bisa-ChrBisa09 16390496 16391821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1130 2 439 CBL-interacting serine-threonine protein kinases AT5G10930 69.488 0.0 654
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Bisa09g1130 Pkinase 1.1e-74 CL0016