Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1128 ATGATAGCCAATCAGGAATTGCACCTCAAAGTCAATGAGATAATGTTAAGGTCTTGGTCAACGGGAGAACATCTAAAATCTGATCATATGGAATTAACATGCGTGGACACTTCTCTCAACCTCAACCTCAGTTCTTCTCGGCACATGGATCTTGTTGCGGTTGAAGCTATGGTGGAAGAATTGCAACGCTTAAGCAGTGAGAATAAGAGGCTAAGCGAGAGGCTGACTCACATGTATGAGAACTACAGTCTTCTGCAAAAGCAATTGAGACAGCTCGTCGGGAACACCAACAGTAATAATTCTGAGAAAATGGAACAAACTCATCAATCGAGGAAGAGAAAGGCTGAGTCTGAGAATTGTATGGCTAATAATATGTTGGGGATTAGTATTAGTGGGAATAATATTACCGAATGCAGCACTGTAATTAGTGAGGAAGAATCATACAAGAGGCCCAAGGACCACACAAACTCAAAGGTTTCTAAATTTCTTGTGCGCACAGAACCATCTGATACTAGCTTATATGTGAGAGATGGATATCAGTGGAGGAAATATGGCCAGAAGGTGACCAGAGACAACCCTTCTCCTAGAGCTTACTTCAGGTGTTCCTTTGCCCCATCCTGCCCTGTGAAAAAGAAGGTGCAAAGAAGCGTAGATGACCCAAATGTGTTGGTGGCAACGTACGAAGGAGAGCACAATCATGGAGATGAAGGCGTGAGGGAGACAGTGGAGGTGGTGGGTTCTGGAATGGTTGACATTAATGTTCAAAAGTCAAGGGGACAGCAGTTTTTGGTTCAACAAATGGCTACATCTTTGACCAGAGATCCCAGGTTCACAGCAGCACTTGCCAAGGCTATTTCAGGAAGAATGTTAGACCATGCTTCTAACTAA 888 0.4358 MIANQELHLKVNEIMLRSWSTGEHLKSDHMELTCVDTSLNLNLSSSRHMDLVAVEAMVEELQRLSSENKRLSERLTHMYENYSLLQKQLRQLVGNTNSNNSEKMEQTHQSRKRKAESENCMANNMLGISISGNNITECSTVISEEESYKRPKDHTNSKVSKFLVRTEPSDTSLYVRDGYQWRKYGQKVTRDNPSPRAYFRCSFAPSCPVKKKVQRSVDDPNVLVATYEGEHNHGDEGVRETVEVVGSGMVDINVQKSRGQQFLVQQMATSLTRDPRFTAALAKAISGRMLDHASN 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1128 295 Coils Coil 54 81 - -
Bisa09g1128 295 SUPERFAMILY WRKY DNA-binding domain 172 234 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa09g1128 295 Pfam WRKY DNA -binding domain 177 233 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa09g1128 295 ProSiteProfiles WRKY domain profile. 177 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa09g1128 295 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 256 289 IPR044810 GO:0003700
Bisa09g1128 295 SMART WRKY_cls 175 235 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa09g1128 295 Gene3D WRKY domain 158 235 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa09g1128 295 MobiDBLite consensus disorder prediction 96 116 - -
Bisa09g1128 295 FunFam WRKY transcription factor 40 160 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1128 Bisa-ChrBisa09 16350898 16353140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1128 28 289 WRKY Transcription Factor Family AT1G80840 43.046 6.78e-68 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bisa09g1128 WRKY 1.1e-23 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1853 05 34896899 34899474 Bisa09g1128 09 16350898 16353140 CCT