Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1117 ATGGGGATATACCTGAGCACTCCCAAAACTGAAAAGTTTTCTGAAGATGGCGAAAATGACCATCTTAGATATGGTTTATCATCTATGCAAGGGTGGCGTGCAACAATGGAAGATGCTCATGCTGCATATCCTGATCTGGATGCGTCTACTTCATTTTTTGGTGTTTATGATGGACATGGAGGGAAGGCGGTTGCTAAGTTTTGTGCCAAGTATCTTCACCAACAGGTTCTTGCGAGCAAAGAATATGAAGCCGGAGATATAGGAACCTCTCTTCAGAAATCCTTTTTCAGAATGGATGAGATGATGCGTGGTCAAAGGGGATGGAGAGAATTAGCAGTTTTGGGGGATAAGATGGACAAGTTCACTGGGATGACAGAAGAATTGATTTGGTCTCCGAGAAGCAGTGACAGTAATGGTCATGTTGATGATTGGCCTTTTGAGGAGGGGCCTCATTCCGATATTGATGGACCAACTTCAGGAAGCACTGCCTGCGTTGCAATTATAAGAAATAAGCAATTAGTTGTTGCGAATGCTGGTGATTCTCGCTGTGTGATATCTAGGAATGGTCAGGCATACAATTTATCTAGAGATCACAAGCCTGATCTTGAGGCTGAGAAGGAAAGAATTTTAAAAGCTGGTGGCTTTATTCAGGCCGGACGTGTTAATGGCAGTTTAAATCTTGCAAGAGCTATAGGTGACATGGAATTTAAACAGAACAAATTTCTGCCTGCTGAAAAACAAATTGTGACTGCCAATCCAGATATAAACACTGTGGAACTTTGCGATGATGACGAATTTATAGTGCTAGCATGTGATGGCATATGGGATTGCATGTCAAGCCAGCAGTTGGTTGATTTTGTGCGTGAACAACTGCGCTTGGAAACTAAACTCTGTGTGGTGTGTGAAAGAGTACTTGATCGATGTTTGGCACCAACAACAGCTGGTGAGGGATGCGATAACATGACAATGATATTGGTGCAGTTCAAGAAACCTGCGCAGTCCACAGAAGAGCAATCCTCTGAAGCTGAAGCTAACATAGACAGAAGCCAAAGTTAA 1056 0.429 MGIYLSTPKTEKFSEDGENDHLRYGLSSMQGWRATMEDAHAAYPDLDASTSFFGVYDGHGGKAVAKFCAKYLHQQVLASKEYEAGDIGTSLQKSFFRMDEMMRGQRGWRELAVLGDKMDKFTGMTEELIWSPRSSDSNGHVDDWPFEEGPHSDIDGPTSGSTACVAIIRNKQLVVANAGDSRCVISRNGQAYNLSRDHKPDLEAEKERILKAGGFIQAGRVNGSLNLARAIGDMEFKQNKFLPAEKQIVTANPDINTVELCDDDEFIVLACDGIWDCMSSQQLVDFVREQLRLETKLCVVCERVLDRCLAPTTAGEGCDNMTMILVQFKKPAQSTEEQSSEAEANIDRSQS 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1117 351 SMART PP2C_4 12 326 IPR001932 -
Bisa09g1117 351 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Bisa09g1117 351 MobiDBLite consensus disorder prediction 331 351 - -
Bisa09g1117 351 CDD PP2Cc 23 328 IPR001932 -
Bisa09g1117 351 PANTHER PROTEIN PHOSPHATASE 2C 20 327 IPR015655 GO:0004722|GO:0006470
Bisa09g1117 351 SMART PP2C_SIG_2 28 328 IPR001932 -
Bisa09g1117 351 SUPERFAMILY PP2C-like 3 330 IPR036457 -
Bisa09g1117 351 Coils Coil 332 351 - -
Bisa09g1117 351 Pfam Protein phosphatase 2C 23 103 IPR001932 -
Bisa09g1117 351 Pfam Protein phosphatase 2C 156 314 IPR001932 -
Bisa09g1117 351 ProSiteProfiles PPM-type phosphatase domain profile. 23 328 IPR001932 -
Bisa09g1117 351 Gene3D - 1 329 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1117 Bisa-ChrBisa09 16235449 16239451 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1117 1 337 PP2C-type Phosphatase Gene Family AT2G25070 77.515 0.0 569