Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1105 ATGGCCTCCAAGCTCTGTGACTCCTGCAAATCGGCTACGGCCACCCTCTTCTGCCGCGCCGACTCCGCCTTCCTCTGCGTTGGCTGTGACTCCAAGGTCCATGCCGCCAACAAGCTCGCCTCCCGTCACGCGCGCGTCTGGGTCTGCGAGGTCTGCGAGCAGGCACCTGCTCACGTCACCTGCAAAGCTGACGCCGCTGCTCTCTGCGTGACTTGCGACCGTGACATCCACTCTGCGAACCCACTCGCTCGTCGCCACGAGCGCGTCCCCGTCACTCCCTTCTACGATCCCGTCCACTCCGTGGGCGGCGCCCCCTCTGGCACTGCCATTAACTTCCTCGACGACCGTTACTTCGCCGACGCCGATGGAGATGCTGATGTCAGCAGGGAAGAGGCGGAAGCGGCTTCTTGGTTGCTTCCCAACCCGTCCAACCCGAAGGCCGTGGAGAGTCCGGATCTGAACTCTGGTGAGTACGTTTTCTCTGAAATGGAGCCGTGCCAAGATCTGGATTTCGGACTGGTGGATCCGAAGGCGGAAGCACAGGAACAGAACAGTTCCGGCACAGACGGAGTTGTACCAGTACAGAGCAAGAGCACACATGTTCCGTCCCTCAACGAACACTACTACGACATGGAATTGTCCGGGTCCAAGTCTTTCGCCTACTGTTACAACAACGAGCAATCTCTGAGTCAAAGTGTATCGTCGTCGTCGTTGGACGTAGGAGTAGTGCCAGACGCGAATGCGATATCGAACGGCTACAGCAAGGCGATGATGGGGAGTGAGAATCAGACGGTTCAGTTTTCAGCTGCAGACCGGGAAGCGAGGGTGTTGAGGTATAGAGAAAAGAGGAAGAACAGAAAGTTCGAGAAGACGATTCGGTACGCTTCCAGAAAGGCCTACGCAGAGACGAGGCCGAGGATCAAAGGGAGGTTCGCAAAACGGTCGGAGGTGGACCGTTTCGGAGGATACGGCGTCGTACCGAGCTGTTGA 990 0.5798 MASKLCDSCKSATATLFCRADSAFLCVGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDPVHSVGGAPSGTAINFLDDRYFADADGDADVSREEAEAASWLLPNPSNPKAVESPDLNSGEYVFSEMEPCQDLDFGLVDPKAEAQEQNSSGTDGVVPVQSKSTHVPSLNEHYYDMELSGSKSFAYCYNNEQSLSQSVSSSSLDVGVVPDANAISNGYSKAMMGSENQTVQFSAADREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRSEVDRFGGYGVVPSC 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1105 329 ProSiteProfiles Zinc finger B-box type profile. 1 48 IPR000315 GO:0008270
Bisa09g1105 329 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 6 317 IPR045281 GO:0009909
Bisa09g1105 329 Pfam B-box zinc finger 46 91 IPR000315 GO:0008270
Bisa09g1105 329 Pfam B-box zinc finger 4 43 IPR000315 GO:0008270
Bisa09g1105 329 CDD Bbox1_BBX-like 5 48 - -
Bisa09g1105 329 ProSiteProfiles Zinc finger B-box type profile. 44 91 IPR000315 GO:0008270
Bisa09g1105 329 SMART bboxneu5 49 91 IPR000315 GO:0008270
Bisa09g1105 329 SMART bboxneu5 1 48 IPR000315 GO:0008270
Bisa09g1105 329 MobiDBLite consensus disorder prediction 179 199 - -
Bisa09g1105 329 Pfam CCT motif 272 314 IPR010402 GO:0005515
Bisa09g1105 329 CDD Bbox1_BBX-like 48 91 - -
Bisa09g1105 329 ProSiteProfiles CCT domain profile. 272 314 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1105 Bisa-ChrBisa09 16047097 16048174 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1105 1 328 C2C2-CO-like Transcription Factor Family AT5G24930 58.953 8.86e-137 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Bisa09g1105 zf-B_box 3.6e-07 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g1105 09 16047097 16048174 Bisa09g1105 09 16047097 16048174 ECH