Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1101 ATGAAAGGCGAAAGCAAAGTAGTATTACTTTTGGTGACGGTGTTGTGGTGTTGCTGTAGATGGGAGTTGTTAGGCAAAGCACAAAAGGCGACGGTGGAAGTGAAAGTTGGGGTTGTGCTTGATCTTAATCTGACGGTGGGAAAGATGGGATTGAGTTGCATTAATATGTCTCTCTCAGAGTTTTACGCCTCTAATCCTCATTACAACACCAGGTTGGTCCTTAATCTTAGAGACTCCAAAGAGAATGTTCTCTCTGCAGCTTCTGCAGCTGTAGACCTCATAAAAAATGCACAAGTTCAAGCAATCATGGGACCAATATCAACAATGCAGACCAACTTCGTAGTGAATCTAGGACAAGAAGCTCAGATGCCTATCATCTCCTTCACTGCCACAAGCCCATCTCTTGCTTCCCTGAGAAGTTCATATTTTTTCCGAATTGCACAAGACGACTCAGCCCAAGTAGGCGCCATTGGAGCCATCATCCAAGCTTTTGGGTGGAAGGAAGCTGTGCCCATTTACGCAGATAACGAGTTTGGAGAAGGAGTCATACCATTGCTAACAAATGCCCTTCAAAAAGTGGATGCTCGAGTCCCTTATCTCAGTGCTATAGCTCCGTCAGCTTCAGATGATCAAATCTCCACTGAGCTTTACAAGTTGATGACTATGCAAACCAGAGTCTTCATTGTACACATGTCAACTGATCTGGGGTCTAGAGTCTTCACCATTGCAAAGCAGATTGGAATGATGAGCGAAGAGTATGTTTGGATTATCACGAATGGGATGGCTAACATGTTGAACTCTTTGGATGGCTCTGTTGTAGATGCAATGCAAGGTGTGTTGGGAGTGAAGACATATGTTCCCAAGAGTAAAAGGCTTCAAGATTTCAAAGTCCGATGGAAGAGGAAATTCCTGCGAGATAATCCAACCATGGTCGATACGAATCTGGACATTTTTGGATTGTGGGCTTATGATGCTACCACAGCACTGGCTATGGCGATTGAGAAGGTTGGGAATGCCAGTTTTGGATTCCGAATTAGTAATGCTTCTACCAATCTGACTGATCTTGATTCGTTGGGTGTCTCTGAAAATGGCGAAAAGTTACGGGACGCTTTATCAAAAATTGGATTTAAAGGCCTTTCCGGAAATTTTAGTGTTACAGATGGGAAATTGCAAGCGACGACGTTTCAGTTAGTTAATGTGAATGGTAATGGCAAGAGAGGGGTGGGATTTTGGACCCCAGAGAATGGACTAATGAGGAATCTAAATCAGAGTTCAACACATGGAACCAAATATTCAGCAAGGAGGAGGAATCTAGGACCCATTATTTGGCCTGGAGAAAGTTACTCAATTCCAAAAGGATGGCAGTTTCCCACAAAAGGAAACAAATTGAGGATAGGAGTTCCTGTAAAGCAGGGTTTCTTTGAATTTGTGAAGATAGAACATGATAATAACACTAACACAACAAAAGTCTCTGGATATTGTATTGACGTCTTCGATGCAGTAGTAAAAGCATTGCCTTATGCTCTGCCATATGACCTCATTCCTTTTGCAAAGCCCAATGGGGAGAGTGGTGGAAGCTACGATGATTTGACCATGCAAGTCTACAATGGGAACTTCAATGCAGTGGTAGGAGACACGTCCATTCTTGCAAACAGGTCAGACTATGTGGACTTCACTATGCCATATTCAGAATCTGGGGTGTCAATGGTGGTGCCCATCAGAGACAATAGGAAGAAGAGTGCGTGGGTTTTTCTTAAACCTCTAACATTGGATCTGTGGGTGATGACCGCTTGTTCTTTTGTGTTCATTGGATTTGTCGTCTGGGTTCTTGAACACCGAGTGAACAAACACTTTCGAGGGCCTCCCTCTCACCAGATTGGCACCAGCTTTTGGTTCTCCTTTTCCACTATGGTCTTTGCACATAGGGAAAGAGTGGTGAGTAACTTGGCAAGGTTTGTGGTGATCATATGGGTGTTTGTGGTGCTTATTTTGACTCAAAGTTACACAGCAAGTTTGACATCATTGTTAACGGTTGAGCAATTGCGACCAACTGTGACTGATGTGAATGAGCTAAAAAAGAATAAATTGAACGTTGGGTACCAAGAAGGTTCTTTTGTCCTAGGGATCTTGCAAGGCCTTGGTTTTGAGGATTTCCAACTTATGCCTTACAATTCTTCCGAACAAATGGACGAACTCCTCACCATAGGAAGTGCAAATGGTGGAATATCTGCTGCATTCGACGAAATCCCTTACATCAGGATTCTTCTTGGGACTTACTGCTCCAAGTACACCATGGTTGACCCAACTTTCAAAACTGACGGCCTCGGCTTTGTTTTTCCAAGAGGATCCTCTCTTGGTGCTGATATTTCAAGGGCCATCCTGAAGGTGACTGAGGATCCCAAAATGCAAGTAATCCAAAACGCATGGTTCCACAACTACAGCACTTGTGCTAACCCAAACACCACATTTTCTTCAAATAGTCTTGACCTTGATAGCTTTTGGGGCCTATTTCTTCTAGTCGGGGTTGCCTCCGTCTCAGCTCTCATCATCTTTGCACTTACGTTTTTATATGAGCATAGACAGATCTGGTTACAGGACAATCCCAATGCCTCGATATGGAGACAAATTAGCATATTACTAAGAATCTTCGACCAAAGAGATTTGAGCTCCCACACTTTTGGGAAGAGTGAAGGGCCACATAAGAGTGAAATGAGCAGTCCTTATCATCATAGCTTAGGTGCAGTTGAGGATTCTTCTAATTCATACTGTCCACAAACTCCATCCAGCCACACAGAATCAAATTTTTCCTTTTATGGGAACCAAGGAATGCCTTCTGAAGACAATATCGAGGCCACTTCTTATGGTGGAGCATCTAATGACGTAGAAGTAACCATTGAGCTCCCTGACGTACCTGCAAGAACTACTTATCCCACTAGAGTAACCCAATTGAACAGTTGA 2958 0.4334 MKGESKVVLLLVTVLWCCCRWELLGKAQKATVEVKVGVVLDLNLTVGKMGLSCINMSLSEFYASNPHYNTRLVLNLRDSKENVLSAASAAVDLIKNAQVQAIMGPISTMQTNFVVNLGQEAQMPIISFTATSPSLASLRSSYFFRIAQDDSAQVGAIGAIIQAFGWKEAVPIYADNEFGEGVIPLLTNALQKVDARVPYLSAIAPSASDDQISTELYKLMTMQTRVFIVHMSTDLGSRVFTIAKQIGMMSEEYVWIITNGMANMLNSLDGSVVDAMQGVLGVKTYVPKSKRLQDFKVRWKRKFLRDNPTMVDTNLDIFGLWAYDATTALAMAIEKVGNASFGFRISNASTNLTDLDSLGVSENGEKLRDALSKIGFKGLSGNFSVTDGKLQATTFQLVNVNGNGKRGVGFWTPENGLMRNLNQSSTHGTKYSARRRNLGPIIWPGESYSIPKGWQFPTKGNKLRIGVPVKQGFFEFVKIEHDNNTNTTKVSGYCIDVFDAVVKALPYALPYDLIPFAKPNGESGGSYDDLTMQVYNGNFNAVVGDTSILANRSDYVDFTMPYSESGVSMVVPIRDNRKKSAWVFLKPLTLDLWVMTACSFVFIGFVVWVLEHRVNKHFRGPPSHQIGTSFWFSFSTMVFAHRERVVSNLARFVVIIWVFVVLILTQSYTASLTSLLTVEQLRPTVTDVNELKKNKLNVGYQEGSFVLGILQGLGFEDFQLMPYNSSEQMDELLTIGSANGGISAAFDEIPYIRILLGTYCSKYTMVDPTFKTDGLGFVFPRGSSLGADISRAILKVTEDPKMQVIQNAWFHNYSTCANPNTTFSSNSLDLDSFWGLFLLVGVASVSALIIFALTFLYEHRQIWLQDNPNASIWRQISILLRIFDQRDLSSHTFGKSEGPHKSEMSSPYHHSLGAVEDSSNSYCPQTPSSHTESNFSFYGNQGMPSEDNIEATSYGGASNDVEVTIELPDVPARTTYPTRVTQLNS 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1101 985 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 34 892 IPR015683 -
Bisa09g1101 985 Gene3D - 63 153 - -
Bisa09g1101 985 SMART GluR_14 462 812 IPR001320 GO:0015276|GO:0016020
Bisa09g1101 985 FunFam Glutamate receptor 324 461 - -
Bisa09g1101 985 Gene3D - 462 580 - -
Bisa09g1101 985 Gene3D - 358 461 - -
Bisa09g1101 985 Gene3D - 154 315 - -
Bisa09g1101 985 FunFam Glutamate receptor 581 711 - -
Bisa09g1101 985 FunFam Glutamate receptor 155 313 - -
Bisa09g1101 985 FunFam Glutamate receptor 462 581 - -
Bisa09g1101 985 Gene3D - 581 706 - -
Bisa09g1101 985 Pfam Receptor family ligand binding region 53 403 IPR001828 -
Bisa09g1101 985 Pfam Ligand-gated ion channel 812 843 IPR001320 GO:0015276|GO:0016020
Bisa09g1101 985 Pfam Bacterial extracellular solute-binding proteins, family 3 487 811 IPR001638 -
Bisa09g1101 985 FunFam Glutamate receptor 727 775 - -
Bisa09g1101 985 SUPERFAMILY Periplasmic binding protein-like II 440 811 - -
Bisa09g1101 985 PIRSF IGluLR_plant 2 951 IPR017103 -
Bisa09g1101 985 SUPERFAMILY Periplasmic binding protein-like I 33 445 IPR028082 -
Bisa09g1101 985 CDD GluR_Plant 461 810 - -
Bisa09g1101 985 CDD PBP1_GABAb_receptor_plant 35 421 IPR044440 -
Bisa09g1101 985 SUPERFAMILY Voltage-gated potassium channels 589 676 - -
Bisa09g1101 985 Gene3D - 761 818 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1101 Bisa-ChrBisa09 16003760 16007870 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1101 16 966 Ion Channels AT2G29110 51.518 0.0 944