Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1086 ATGATCCTGACCGACACGGACCTTGCTGAACCGCCAAGACGACCCAGAGTTGAAGTGATAAGTAGCAAGGGATGCTCTGGACTGTTTTCACCCTCATTGACTTCATTCAGGGGTTCGCATCTGCAACCATTGGAGCCAATGACTCCTGTTTCATCGTCTCTCGGTTCTGGACCTGGGGAAGTGCGATCAAATGCACCTTTTGCTGATCTCGTTATATGCGTTACTGGTCTATCTAAAGAAGCAAGGAAACAGGTCATGGAGGCTACAGAGAGATTAGGTGGCCAATATAGCCCCAATTTGCATCCTCAATGTACCCATTTGGTGTTTGAGCATGCTTTGAAGCATGGAGCAAGAAATGGTCTCGTTGTTGTTACACTGGGTTGGTTTGTAGATAGTGTTCGGAAAAATGTGAGGTTGAGTGAATCATTTTACAATGTCAAGAACTATACGGGAAACAATATGCACTTGGATGATTATAAACTGCTTGCTGGGCATACCAATGCTGAAAATTCTTGTCTTCCTGCAAGAATTCGGGAAACAAAGCAAGTTGAAGAAGTTCAAAGATTTTATCACAGGGAGTCTAGCAATGGCATGGACTTGACTTTATCTGGTTGCTCTATCTACATTGATCCAGGAATCTCACCTGAATTGCAGAATAAGGTTGTTGAGACTGCTTCCAGAGAAGGTGCCAATTTGGTGGAACAGTGGTTAGTTGGTTGCAATGCTAGTCATGTAGTTGTTGAAGGGACTTCCATCCGGAAATATCTTGGATACTCCAGTAACTTCATTACTCCACTGTGGATTCTGAAAACAGCTAAGGAGAAACAAATGCAAAGGCTTGTTCACATGTCTGCTGATTTGGCAAGGCAAGTTGGTTTGATGCTTGAGGACATTCATAACATTGCGGGGGAGGAATCACTTAAGCAAGTCCTCCCTGAAAATCTTCAGGGCATTAAAAGTAAAGTAAATTACAAAGAAAGGCAACAGATTGTGAATTCTGCAAAAATTGGTACTTGTCAGACTCCAGTGCGTCCTATAACACCCAACAACCTTCTGGATTCTATTTGCTGGTCAATATCTGAGCCAACTTCAACAGCTTCCATTTACACTGACTCTTTGAGTGTTGAAGATCCTAGTGAAAATCATCCTTCAATTTTTTTTGACGCAAAGGGGGTTGTTAAGGATTCAGAAGCCTCATTTTCAAACTCCACTCGATCTCTGACTGAAAGGTTTGAGAAATCTGAATTGATATTTAAAAGCCATTTTCTTACCATTCTGTTCCCGATTGACCGATTTGCTGAGATAGGTCCTTCTTCAAGAACATATTTCAGCCATAATGGCTTTACATGTCTGCAGGTGTTGGACCATATTTATGCATTTTATCAGGAGAATCTGTCAACCCACGAAATAGAAGCTGCAATTCACAGTGATTCAAGACATGCGGATAGGCTTCGATCAGTGTACTGCAGTAAAGAAACAGAAGAGCGTGGGTTTGTGATGTTCAAAAGGATTGATTTCCTGGGTAGTCGCACGAGTTTTGAAATGTTGAAACGTGTAACTGGGGACAACAACTCTAACGTCTATGAACTATTACTCAGGGCTTAA 1605 0.4199 MILTDTDLAEPPRRPRVEVISSKGCSGLFSPSLTSFRGSHLQPLEPMTPVSSSLGSGPGEVRSNAPFADLVICVTGLSKEARKQVMEATERLGGQYSPNLHPQCTHLVFEHALKHGARNGLVVVTLGWFVDSVRKNVRLSESFYNVKNYTGNNMHLDDYKLLAGHTNAENSCLPARIRETKQVEEVQRFYHRESSNGMDLTLSGCSIYIDPGISPELQNKVVETASREGANLVEQWLVGCNASHVVVEGTSIRKYLGYSSNFITPLWILKTAKEKQMQRLVHMSADLARQVGLMLEDIHNIAGEESLKQVLPENLQGIKSKVNYKERQQIVNSAKIGTCQTPVRPITPNNLLDSICWSISEPTSTASIYTDSLSVEDPSENHPSIFFDAKGVVKDSEASFSNSTRSLTERFEKSELIFKSHFLTILFPIDRFAEIGPSSRTYFSHNGFTCLQVLDHIYAFYQENLSTHEIEAAIHSDSRHADRLRSVYCSKETEERGFVMFKRIDFLGSRTSFEMLKRVTGDNNSNVYELLLRA 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1086 534 ProSiteProfiles BRCT domain profile. 62 146 IPR001357 -
Bisa09g1086 534 Pfam Family of unknown function (DUF6699) 427 518 IPR046522 -
Bisa09g1086 534 PANTHER BRCT DOMAIN DNA REPAIR PROTEIN-RELATED 15 534 - -
Bisa09g1086 534 Gene3D BRCT domain 65 148 IPR036420 -
Bisa09g1086 534 SMART BRCT_7 64 136 IPR001357 -
Bisa09g1086 534 SMART BRCT_7 199 275 IPR001357 -
Bisa09g1086 534 CDD BRCT_TopBP1_rpt2_like 66 136 - -
Bisa09g1086 534 ProSiteProfiles BRCT domain profile. 197 277 IPR001357 -
Bisa09g1086 534 Pfam twin BRCT domain 70 112 IPR001357 -
Bisa09g1086 534 SUPERFAMILY BRCT domain 69 157 IPR036420 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1086 Bisa-ChrBisa09 15801686 15808640 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1086 58 146 Core DNA Replication Machinery Family AT1G77320 36.170 4.44e-08 54.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g1086 09 15801686 15808640 Bisa09g1086 09 15801686 15808640 ECH