Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1079 ATGACTCCCAAGAAGATCACATGGAAGTCTTTCATCTTCGTCCTGAGTTGTTACAAGACTAGATTCCCATTGAAGGAATCCAAAAAGAAGATTTTCAAAAAAGGTTCCTTCCAGAGACTCTGCCTCTCTGATATTAGCATTTCAAGCTCCCCACAGGCTATTGAGGATATTTCCATCTCTATCTCCCTGAAGGGCTCAAAGCTTCATACATTCAGGTTGGAAGAGCTGAGAGAGGCAACAAATGATTTCTGTAAGAGTAATCTAATTGGTGAAGGTGGGTTTGGACCTGTGTACAAGGGATTTGTAGACGACAAGCTTAGGCCTGGTTTGAAGGCTCAGCCTGTAGCGGTGAAACGACTAGACTTGGATGGCTCGCAGGGTCACAGGGAGTGGCTGGCAGAGATAATCTTTCTTGGACAGCTAAGGCATCCACATGTTGTTAACTTAATTGGGTACTGTTACGAGGAAGAAAACAGGCTTTTGGTGTATGAATACATGGCCAGAGGCAGCTTGGAGAACCAACTCTTCAGAAGATACTCTGTTGCGTTGCCGTGGTCAACCAGGATGAAGATTGCATTAGGAGCAGCAAAGGGCCTAGCCTTCCTTCATGAATCAGACAAACCGGTCATATGCAGGGATTTCAAAACTTCAAACATCTTATTAGACTCGGATTACACAGCAAAACTCTCGGACTTCGGGCTCGCGAAGGACGGACCTGAAGGGGAAGAAACCCATGTAACAACACGCGTCATGGGGACACAGGGCTATGCTGCTCCTGAGTACATCATGACAGGTCACCTCACAACCAAGAGCGATGTGTTTAGCTATGGGGTGGTTCTATTGGAGTTGATAACAGGTAAAAGGGTCGTGGATAGGAGGAGGCCTAGTCGGGAGCAGAGTCTAGTGGAATGGGCTAGGCCTCTGTTAAGAGACCCAAGAAAGCTTCATCGAGTCATAGACCCTCGCCTGGAAGGCCAGTTTCCCATCAAAGGAGCTCACAAGGTCGCTGCTTTGGCTTACAAGTGCTTGAGCCACCACCCCAACCCAAGACCCACCATGAGTGACGTGGTCAAGATATTGGAGCCACTTCAGCACTTTGACGACGTATTCATGGAGCCCTTTGTGTATGTTGCCGTCAACGAAAATAGAATTGCAGCAGACATCATAGCACTGGTTAATGGCGACTCAAGTTGCAGTCGCCGGTACTCTCACAGAGCACGATCGCCGGATTCTGACGGCTGTGAACGCCGGAGCTTCCAGCCTTTCATTCTTCGGCTCGGGCTTCATTGTCCTCTGCTACGTCATGTTCAAGGAGCTACGCAAGTTTTCGTTCAAGCTTGTTTTCTACCTCGCCCTCACCGACATGCTCTGCAGTTTCTTCAACATAGTAGGGTACGCCTGCTGAATCAAGTGAAGTTTCTTTTGTTATGCTCAGGGATATAG 1443 0.4809 MTPKKITWKSFIFVLSCYKTRFPLKESKKKIFKKGSFQRLCLSDISISSSPQAIEDISISISLKGSKLHTFRLEELREATNDFCKSNLIGEGGFGPVYKGFVDDKLRPGLKAQPVAVKRLDLDGSQGHREWLAEIIFLGQLRHPHVVNLIGYCYEEENRLLVYEYMARGSLENQLFRRYSVALPWSTRMKIALGAAKGLAFLHESDKPVICRDFKTSNILLDSDYTAKLSDFGLAKDGPEGEETHVTTRVMGTQGYAAPEYIMTGHLTTKSDVFSYGVVLLELITGKRVVDRRRPSREQSLVEWARPLLRDPRKLHRVIDPRLEGQFPIKGAHKVAALAYKCLSHHPNPRPTMSDVVKILEPLQHFDDVFMEPFVYVAVNENRIAADIIALVNGDSSCSRRYSHRARSPDSDGCERRSFQPFILRLGLHCPLLRHVQGATQVFVQACFLPRPHRHALQFLQHSRVRLLNQVKFLLLCSGI 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1079 480 FunFam Serine/threonine-protein kinase BIK1 49 165 - -
Bisa09g1079 480 ProSiteProfiles Protein kinase domain profile. 83 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g1079 480 FunFam Probable serine/threonine-protein kinase PBL8 166 377 - -
Bisa09g1079 480 Gene3D Phosphorylase Kinase; domain 1 45 165 - -
Bisa09g1079 480 SUPERFAMILY Protein kinase-like (PK-like) 65 363 IPR011009 -
Bisa09g1079 480 Gene3D Transferase(Phosphotransferase) domain 1 166 372 - -
Bisa09g1079 480 PANTHER OS01G0588500 PROTEIN-RELATED 53 364 - -
Bisa09g1079 480 Pfam Protein tyrosine and serine/threonine kinase 87 360 IPR001245 GO:0004672|GO:0006468
Bisa09g1079 480 CDD STKc_IRAK 89 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1079 Bisa-ChrBisa09 15757557 15762742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1079 69 360 Glycoside Hydrolase AT3G07070 54.237 4.69e-103 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bisa09g1079 PK_Tyr_Ser-Thr 2.2e-47 CL0016