Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1071 ATGCCATCTAGCCTCGTACAAACTTTCCCTCTTCTTCCCTTTAATCATTTTCCTCCGGTGGGATCACATTTGCCTTCTCGTTTCCAGCATCATCTTGAAGAAACGGCAATGGATTCACTGAGCAGTCAAGGACGCAAGAAGGAAACTTGCAGAGGAGCCTGGACAACTGATGAAGACCAGAAATTGGTTCAGGTCATTGAGTTACATGGCCCAAAGAGGTGGAAGTTTCTAGCAGCCAAAGCAGGTCTGAACCGGTGTGGCAAGAGTTGTAGATTGAGATGGTTGAATTATCTTCGACCCAATATCAAGAGAGGCAACATATCTGACCAAGAGGAGGACTTGATTCTCAGGCTTCATAAACTCCTAGGCAACAGGTGGTCGTTGATTGCTGGAAGGCTTCCGGGGCGAACAGACAATGAGATTAAGAATTACTGGAACTCTCATTTGAGCAAGAAGATAAATTCCAGGAAGCAAAACAGAGGATTGAAAACAGAGTCCAGGTTGAAGATAAGTGCAGCGCCTGAGGTCGTTGCTGATGGTGGTAGTAATAAAGAAGAGGGTACCTCTAAGGTCACGGAGGACTCAAGGTCCAGCTTTGTGGGACTTGACGGTGATGGGTCTTTTCCTTGTGGCAGTGAAGGCCCACTAGATTTGGAATGGGTGAGTCAATTTCTTGAAATGGATGAGACTTGGTTTGGTTTCGCAGACATGTGA 714 0.4622 MPSSLVQTFPLLPFNHFPPVGSHLPSRFQHHLEETAMDSLSSQGRKKETCRGAWTTDEDQKLVQVIELHGPKRWKFLAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKINSRKQNRGLKTESRLKISAAPEVVADGGSNKEEGTSKVTEDSRSSFVGLDGDGSFPCGSEGPLDLEWVSQFLEMDETWFGFADM 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1071 237 SUPERFAMILY Homeodomain-like 50 145 IPR009057 -
Bisa09g1071 237 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 99 153 IPR017930 -
Bisa09g1071 237 Pfam Myb-like DNA-binding domain 104 149 IPR001005 -
Bisa09g1071 237 Pfam Myb-like DNA-binding domain 51 98 IPR001005 -
Bisa09g1071 237 Gene3D - 107 172 - -
Bisa09g1071 237 ProSiteProfiles Myb-like domain profile. 46 98 IPR001005 -
Bisa09g1071 237 Gene3D - 50 103 - -
Bisa09g1071 237 MobiDBLite consensus disorder prediction 177 198 - -
Bisa09g1071 237 ProSiteProfiles Myb-like domain profile. 99 149 IPR001005 -
Bisa09g1071 237 CDD SANT 108 149 IPR001005 -
Bisa09g1071 237 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 45 175 - -
Bisa09g1071 237 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 46 98 IPR017930 -
Bisa09g1071 237 FunFam MYB-related transcription factor 50 103 - -
Bisa09g1071 237 SMART sant 103 151 IPR001005 -
Bisa09g1071 237 SMART sant 50 100 IPR001005 -
Bisa09g1071 237 CDD SANT 53 98 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1071 Bisa-ChrBisa09 15579601 15580669 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1071 40 186 MYB Transcription Factor Family AT5G40330 50.340 4.49e-52 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa09g1071 Myb_DNA-binding 6.7e-17 CL0123