LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa09g1060	ATGGGCAACTACGACGAAGACGATGGAGACAGAAGCGAAGGAGATACAGCGAAGGGTGAGCACGGCAGAAAAGGATATCCACAGATCTATACATGTGTCCATGGAGGTTCGTGGTCGAAGTGTCTACAGGGAAAAAGGAAAACATCAGAGCACGTGGCATGCCATGTAGAAGATAGTGAATCTATCTGGGAAAGTCTTACTGAATTCGTTCAGCTGTTGGAGTGGCTCCAATCCACCAAAGTGGCGAAGATGAGTTTAAGTGCAGCCGAGGATGATTCATCTTCAGAAATTCACATCCCAGGTGAGATTGATTGGCACATGCTTGACAAGTCTAAATTCTTCTTCCTCGGCGCTGCTTTATTTTCTGGCGTATCAGCTGGGCTTTATCCTATCATAGTGTTGAAGACCCGCCTGCAGGTTTCTCCAACCCAGATTTCTTGCTTCAAAATGTCTTGTGCCATTATGCGCTACGAAGGGTTCAGAGGGTTCTACAAAGGCTTTGGCACTTCCTTGATGGGAACAATCCCTGCTCGAGCGCTTTACATGGGTGCCCTCGAAATTACTAAGAGCAATGTTGGTACTGCTACTGTTGGACTGGGGTTTTCAGATACTACAGCCACCGCCATAGCTAATGCTGCGGCAGGATTGACTTCTGCCATGGCTGCACAATTAGTCTGGACCCCAGTTGATGTGGTGAGCCAAAGACTCATGGTTCAAAGCAGTAATGGGAGCACAAACATACTCCCCCGTGTCAATTCTGGGAATTACAGGAATGGTGTTGATGCGTTTAGGAAAATTCTTTGTACAGATGGACTGCGAGGATTGTACAGGGGCTTTGGAATTTCAATACTGACTTATGCACCATCCAATGCGGTTTGGTGGACTTCTTACTCTATGGTCCATAGGCTCATGTGGGGTGCTTTTGGTTGCTATATGGGTAAGAGGGATGAGAGTAATTTGGGTAATGGGTGTGGTTTTAGGCCTGATTCCAAGGCAGTGGTGGCAGTTCAAGGATTGAGTGCGGTTATGGCCAGTGGCGTATCAGCTGTTATAACTATGCCTTTTGACACCATCAAGACAAGGATGCAGGTGTTGGATGCAGAGGAAAATGGACGAAGGAAGCCATTAACTGTTGTGCAGACAGTGAGGAATTTGATGAAGGAAGGTGGCCTCCTTGCATGTTACAGAGGATTGGGTCCAAGGTGGTCCTCAATGTCCATGTCTGCAACAACCATGATTACAACCTATGAGTTTTTGAAACGAATGTCTACCAAGAGTCAAGATAAGATCACTGCATAA	1299	0.4657	MGNYDEDDGDRSEGDTAKGEHGRKGYPQIYTCVHGGSWSKCLQGKRKTSEHVACHVEDSESIWESLTEFVQLLEWLQSTKVAKMSLSAAEDDSSSEIHIPGEIDWHMLDKSKFFFLGAALFSGVSAGLYPIIVLKTRLQVSPTQISCFKMSCAIMRYEGFRGFYKGFGTSLMGTIPARALYMGALEITKSNVGTATVGLGFSDTTATAIANAAAGLTSAMAAQLVWTPVDVVSQRLMVQSSNGSTNILPRVNSGNYRNGVDAFRKILCTDGLRGLYRGFGISILTYAPSNAVWWTSYSMVHRLMWGAFGCYMGKRDESNLGNGCGFRPDSKAVVAVQGLSAVMASGVSAVITMPFDTIKTRMQVLDAEENGRRKPLTVVQTVRNLMKEGGLLACYRGLGPRWSSMSMSATTMITTYEFLKRMSTKSQDKITA	432

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa09g1060	432	ProSiteProfiles	Solute carrier (Solcar) repeat profile.	332	422	IPR018108	-
	Bisa09g1060	432	Gene3D	Mitochondrial carrier domain	113	431	IPR023395	-
	Bisa09g1060	432	PRINTS	Mitochondrial carrier protein signature	123	141	IPR002067	GO:0055085
	Bisa09g1060	432	PRINTS	Mitochondrial carrier protein signature	164	182	IPR002067	GO:0055085
	Bisa09g1060	432	PRINTS	Mitochondrial carrier protein signature	215	237	IPR002067	GO:0055085
	Bisa09g1060	432	Pfam	Mitochondrial carrier protein	207	305	IPR018108	-
	Bisa09g1060	432	Pfam	Mitochondrial carrier protein	120	191	IPR018108	-
	Bisa09g1060	432	Pfam	Mitochondrial carrier protein	335	426	IPR018108	-
	Bisa09g1060	432	MobiDBLite	consensus disorder prediction	1	22	-	-
	Bisa09g1060	432	ProSiteProfiles	Solute carrier (Solcar) repeat profile.	109	191	IPR018108	-
	Bisa09g1060	432	SUPERFAMILY	Mitochondrial carrier	107	419	IPR023395	-
	Bisa09g1060	432	ProSiteProfiles	Solute carrier (Solcar) repeat profile.	206	303	IPR018108	-
	Bisa09g1060	432	PANTHER	MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J	93	427	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa09g1060	Bisa-ChrBisa09	15488609	15494414	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa09g1060	84	428	Chloroplast and Mitochondria Gene Families	AT1G72820	65.230	1.93e-160	454