Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1056 ATGCTTTTCATACCAACCATGGCAGATAATTATTCATCTGAGGGTGACTCCACCGCCCAGTGGCCTCTTGAGCTGTCTGAGTACCTGAACTTCGATGATGATCAATGGCCAGACCACAATGATCTGAACGAGTCATATGTTTCTGGCCATGTCTTCAACCAGCAGGGCTATCAAACCTCCTCTGAAGTTAGTGACTTGGGTGGAAGGTACAGACACGTTGAGGGGTCTTCTATCAGTACAACACTAACTAGCGAGAAAAAGGAGGTTAGAGAGAGATTTGCATTCAGAACAAGGTCAGAGGTTGAAATACTCGATGATGGGTATAAATGGAGGAAGTATGGGAAGAAGATGGTGAAGAACAGCCCCAATCCAAGGAACTATTACAGGTGTTCAGTGGAAGGATGTCCCGTGAAAAAGAGAGTTGAGAGAGATAGGGATGATCCCAAGTATGTAATAACAACCTATGAAGGCAACCACACCCATCTCAGTTCTTACTAG 498 0.4498 MLFIPTMADNYSSEGDSTAQWPLELSEYLNFDDDQWPDHNDLNESYVSGHVFNQQGYQTSSEVSDLGGRYRHVEGSSISTTLTSEKKEVRERFAFRTRSEVEILDDGYKWRKYGKKMVKNSPNPRNYYRCSVEGCPVKKRVERDRDDPKYVITTYEGNHTHLSSY 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1056 165 SUPERFAMILY WRKY DNA-binding domain 96 161 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa09g1056 165 Gene3D WRKY domain 91 157 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa09g1056 165 FunFam WRKY transcription factor 57 90 164 - -
Bisa09g1056 165 ProSiteProfiles WRKY domain profile. 99 164 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa09g1056 165 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 66 161 IPR044810 GO:0003700
Bisa09g1056 165 SMART WRKY_cls 104 163 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa09g1056 165 Pfam WRKY DNA -binding domain 105 161 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1056 Bisa-ChrBisa09 15467362 15468046 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1056 7 163 WRKY Transcription Factor Family AT5G26170 49.714 6.40e-45 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bisa09g1056 WRKY 9.8e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g1056 09 15467362 15468046 Bisa09g1056 09 15467362 15468046 ECH