Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1050 ATGTCGACGGTGTACGTGTTAGAACCGCCGACGAAAGGGAAGGTGGTGTTGAACACGACGTATGGTCCCCTTGACATTGAGCTCTGGCCCAAGGAGGCCCCCAAGGCCGTCAGGAATTTCGTGCAGCTCTGCCTTGAAGGCTACTACGATAAAACCATCTTTCACCGTATCATTAAGGATTTTCTTATCCAGGGCGGCGATCCCACTGGCACCGGCACAGGGGGTGAAAGTATTTATGGGAGTGTCTTCTCTGATGAATTTCATTCACGCCTAAGATTTAAGCATAGAGGTTTGGTTGCAATGGCTAATTCTGGATCACCACATTCAAATGGTAGTCAGTTTTTCATAACTCTGGACCGTTGTGACTGGCTTGATCGGAAGCATACAATTTTTGGAAAGGTGACTGGAGACACTCTATATAATCTTTTGAGACTGGGTGAACTTGAAACTGATAAGAATGATCGGCCCTTAGATCCTCCCAAGATAGTATCAGTTGAGGTTTTATGGAACCCATTTGATGATATTGTTCCAAGAACACTTCAACCTCAGATCCAAACTACTACTGATAGAGACAGTAAAGAATCAAAGAAGAAAGCTGTAAAAAAACTAAACTTGCTTTCATTTGGAGAAGAAGCTGAGGAAGAGGAAAAGGAATTGGCATCTGTAAAGCAAAAAATTAAGAGCAGTCATGATGTATTGGATGATCCTCGTCTTCTGAAGGAAGCAGCTCCTAATAATAAATTGGGCTCATCTGGTAGTAAGTCAACAAGAGATGTGCAGTTATCTGTAAGAGATGCACTAAGCTCAAAGAAAGAAGAATCTCTGAAAGATTTAGAAGCTAATGACTTGACCAGCCTTGATAGTGATGATGATGAGGCAGATTTTGATGCCCGAATGCGCTCACAAATACTGAAGAAGCGGAAAGAGTTGGGGCATCTACTACTGAAACCCAAGTTGCAAAATGGAAGCTCTAGTCCAAAGAACCATGATACATCAACAACCAGGTCCAATGCTTTAAGTGTTGATAATAATGATCAACCTAGGGTGGAAAAGTTGTCCATGAAGAAAAAGGGAATAGGATCGGAAGCAAGAGCTGAGCGAATGGCTAATGCAGATACAGATTTACAATTACTCAATGAAGCTGAGAAAGGAAGACAGTTGCTGAAGCAGAAGAAACGTAGATTACAAGGACGTGAAGATGAACTTCTCGCAAAACTTGAGAAATTTAAGAAGTCTCTATCTGAAAAGGCCACACCCACAACTGGTGGATCTGGAGATGCTAAACCTAAAGATGAGGATTTGTCTGACTGGAGAAGTGTTAGCTTAAAATTTGCGCCCGAGACTGGCAAAGATCGGATGTCTCGTAATGATGACCCTAATGACTACGTTGTGCATGACCCTCTTTTGGAGAAGGGGAAAGAGAAGTTCAATAGGATGCAAGCCAAACAGAAGAGACGAGGGCGAGAGTGGGCTGGGAAATCCCTTACTTGA 1491 0.4286 MSTVYVLEPPTKGKVVLNTTYGPLDIELWPKEAPKAVRNFVQLCLEGYYDKTIFHRIIKDFLIQGGDPTGTGTGGESIYGSVFSDEFHSRLRFKHRGLVAMANSGSPHSNGSQFFITLDRCDWLDRKHTIFGKVTGDTLYNLLRLGELETDKNDRPLDPPKIVSVEVLWNPFDDIVPRTLQPQIQTTTDRDSKESKKKAVKKLNLLSFGEEAEEEEKELASVKQKIKSSHDVLDDPRLLKEAAPNNKLGSSGSKSTRDVQLSVRDALSSKKEESLKDLEANDLTSLDSDDDEADFDARMRSQILKKRKELGHLLLKPKLQNGSSSPKNHDTSTTRSNALSVDNNDQPRVEKLSMKKKGIGSEARAERMANADTDLQLLNEAEKGRQLLKQKKRRLQGREDELLAKLEKFKKSLSEKATPTTGGSGDAKPKDEDLSDWRSVSLKFAPETGKDRMSRNDDPNDYVVHDPLLEKGKEKFNRMQAKQKRRGREWAGKSLT 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1050 496 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 15 167 IPR002130 GO:0000413|GO:0003755
Bisa09g1050 496 Coils Coil 205 232 - -
Bisa09g1050 496 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 11 217 IPR044666 -
Bisa09g1050 496 Coils Coil 378 412 - -
Bisa09g1050 496 MobiDBLite consensus disorder prediction 448 496 - -
Bisa09g1050 496 CDD cyclophilin_CeCYP16-like 8 179 - -
Bisa09g1050 496 SUPERFAMILY Cyclophilin-like 14 180 IPR029000 -
Bisa09g1050 496 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 126 141 IPR002130 GO:0000413|GO:0003755
Bisa09g1050 496 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 125 IPR002130 GO:0000413|GO:0003755
Bisa09g1050 496 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 28 43 IPR002130 GO:0000413|GO:0003755
Bisa09g1050 496 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 54 66 IPR002130 GO:0000413|GO:0003755
Bisa09g1050 496 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 98 113 IPR002130 GO:0000413|GO:0003755
Bisa09g1050 496 MobiDBLite consensus disorder prediction 348 369 - -
Bisa09g1050 496 MobiDBLite consensus disorder prediction 246 263 - -
Bisa09g1050 496 Gene3D - 2 182 IPR029000 -
Bisa09g1050 496 MobiDBLite consensus disorder prediction 393 414 - -
Bisa09g1050 496 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 22 167 IPR002130 GO:0000413|GO:0003755
Bisa09g1050 496 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 49 66 IPR020892 GO:0003755|GO:0006457
Bisa09g1050 496 MobiDBLite consensus disorder prediction 318 347 - -
Bisa09g1050 496 MobiDBLite consensus disorder prediction 230 275 - -
Bisa09g1050 496 MobiDBLite consensus disorder prediction 307 496 - -
Bisa09g1050 496 FunFam Peptidyl-prolyl cis-trans isomerase CWC27 homolog 1 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1050 Bisa-ChrBisa09 15429785 15439477 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1050 9 172 U-box Gene Family AT5G67530 50.610 8.24e-47 169