Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1041 ATGGAGGGGATCAAAATAAAAGAGGAAGAAACGGTGACATGTGCAGCTGGTTCGTCATCTTCTTCGCCTTCAAGCTTGTCACCTCGCCCCATGGAAGGCCTGCACGAGATGGGGCCTCCTCCATTTCTTACCAAGACCTTCGATATGGTGGAAGACCCATCCACCGACTCTATTGTTTCCTGGAGCATTGCTCGTAACAGCTTCATCGTCTGGGACTCTCACAAGTTCTCCACCAAAATTCTTCCTCGCTACTTCAAGCACAGTAATTTCTCCAGCTTCATTCGCCAGCTCAATACCTATGGCTTTAGAAAAGTTGATCCCGATAGATGGGAATTCGCGAACGAAGGGTTCTTGGGAGGACACAGGCACTTATTGAAGACCATCAAGAGAAGAAGGAACGTGACTCAGAGTATTCAGCAGCAAGGAGGAGGTGCTTGTGTTGAACTGGGGCAATATGGATTGGAAGGTGAGCTTGACAGGCTGAGAAGAGACAGGACGGTGTTAATGGCAGAAATCGTGAGGCTGAGGCAGCAGCAGCAGAACTCACGCGGCCAACTGATTGCAATGGAGACAAGGTTACAGAGCACAGAGAAGAAACAGCACCAGATTCTCACTTTCCTTGCTAAAGCACTGAATAACCCAACCTTCGTTCAACAGTTGCAGAGAAACACCCAGAACAGAGAATTACAGGGTGTTGAGATGAGGCGAAAGAGGAGACTAACTGCTAGCTCAAGTTTGGAGAATCTTCAAGAAGATCCCGTGACAGTGGCAGTGCCTAGTGAACCAGTTGTGGACTATGCGATTCCCACACAAGAACAAGAAGAATTCGCCACGATGGAGTCCGAGATAGAGACGTTCTTCTCAGCTGCGTATGACAATGAATCAAGCAGTGACATCAAGGAGCCTGTGTCAAGTTCAGTTCCAGCAACTAGTGGGAGCAATTTGGGACCAGTGAGTGATGCAATATGGGAAGACTTGTTGAACGAAGATTTGGTTGGTGGGAATCCAGAGGAGGAAGTGATAATTGGTGATGCGCCTGTGGAAGATATGGCAGCCAAGTTCGATGACTGGTCTGAGGGATTTCAGGACATTGTGGATCAAATGGGTTATCTTGGTTTGGCCTCTGCAACTCCATTCTCCTTCACTCCTATTCGCGTTGCAATATGGTGGTACGGCCGAAAGTGTTTTTTTGATATTTATGGCTTCCGAAATTTCTGTGGTGGCCAGGATATTAACAAGGAGGTAATTTTGATGATTGATAGGAGTTGGGGTAGTCCAATACTGCACAGGATCACACTGGCTGGAGTCTTGCTCTTTTAG 1320 0.475 MEGIKIKEEETVTCAAGSSSSSPSSLSPRPMEGLHEMGPPPFLTKTFDMVEDPSTDSIVSWSIARNSFIVWDSHKFSTKILPRYFKHSNFSSFIRQLNTYGFRKVDPDRWEFANEGFLGGHRHLLKTIKRRRNVTQSIQQQGGGACVELGQYGLEGELDRLRRDRTVLMAEIVRLRQQQQNSRGQLIAMETRLQSTEKKQHQILTFLAKALNNPTFVQQLQRNTQNRELQGVEMRRKRRLTASSSLENLQEDPVTVAVPSEPVVDYAIPTQEQEEFATMESEIETFFSAAYDNESSSDIKEPVSSSVPATSGSNLGPVSDAIWEDLLNEDLVGGNPEEEVIIGDAPVEDMAAKFDDWSEGFQDIVDQMGYLGLASATPFSFTPIRVAIWWYGRKCFFDIYGFRNFCGGQDINKEVILMIDRSWGSPILHRITLAGVLLF 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1041 439 ProSitePatterns HSF-type DNA-binding domain signature. 81 105 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa09g1041 439 MobiDBLite consensus disorder prediction 12 34 - -
Bisa09g1041 439 Coils Coil 158 178 - -
Bisa09g1041 439 Gene3D - 35 132 IPR036388 -
Bisa09g1041 439 Pfam HSF-type DNA-binding 42 131 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa09g1041 439 SUPERFAMILY "Winged helix" DNA-binding domain 38 131 IPR036390 -
Bisa09g1041 439 MobiDBLite consensus disorder prediction 13 28 - -
Bisa09g1041 439 FunFam Heat shock transcription factor 1 35 132 - -
Bisa09g1041 439 PRINTS Heat shock factor (HSF) domain signature 80 92 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa09g1041 439 PRINTS Heat shock factor (HSF) domain signature 93 105 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa09g1041 439 PRINTS Heat shock factor (HSF) domain signature 42 65 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa09g1041 439 SMART hsfneu3 38 131 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa09g1041 439 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 28 281 IPR027725 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1041 Bisa-ChrBisa09 15336342 15338166 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1041 28 372 HSF AT2G26150 52.722 6.42e-123 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Bisa09g1041 HSF_DNA-bind 1.3e-31 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g1041 09 15336342 15338166 Bisa09g1041 09 15336342 15338166 ECH