Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1030 ATGCCCAGAATGAAGCATCTACTAAGAAAGCTTCACATCGGTGGTGGTATCAATGATCACCAGAGATTGCCTGAGACTCCCCCGGTGCTCAGCCCTACCCCCAATCTCTCTTTATCTTCTTCTACCTTGCCATCGCCTACGATGGCCACTGTCGCTGCTAATGAATCTGTTGCTGATCGGACCGCTATTGATGGTACCGCGGGTGTTGGTGGCGACACGGGAGTGGATTTCAGTCTTATGGAAGAGGAGTTCCAGATGCAGTTGGCTCTGGCAATTAGCGCTTCCGATCCTGATGTACGCAAGGACCCCGATTCTGCTCAGATCGATGCTGCCAAGCAGATGAGCCTCGGGTGTGAAGCTTCTGTTACCGACACGGAAGCCCTTGTTCAGTTTCAATCGCTTCGTTATTGGAACTACAATGTCATTGATTATGAAGAGAAAGTGATGGATGGATTTTATGATGTTTATGGCATCACCTCAAATTTAGTTGAACGAGGAAAGATGCCATTGTTGGTGGATCTGCAAACAACGTCCATCTCAGAAAATCTTGATTGTGAAGTGATTTTGGTGAACCGCATAGTTGATCTTGAGCTGAAGCAGCTTGAGCAACAAGCCTGTGAATTATCGAAGGACTGTTACCTTTTTGAACGAGGACTAATTTTAAGTGGCTTACTTCAGAAACTTGCTGATATTGTTGTTAATAGAATGGGTGGGCCAGTTGGTGATGCTGATGAAATGTTGAAAAGGTGGACCGTAAGGAGCTGCCAGTTAAGAAATTCTTTAAGAACCGTTGTTCTTCCCCTTGGCTGTCTTGATATTGGACTTTCTCGTCATCGAGCCCTTCTATTTAAGGTACTTGCTGATAGAATTGACATTCCCTGTATGCTAGTCAAAGGGAGTTATTACACTGGAACTGATGATGGAGCTGTGAATTTGATCAAAGCTGATGATGGAAGTGAATACATAATTGATCTGATGGGTGCTCCTGGTGCTCTTATTCCTGCTGAAGTACCCAGCAGTCAGCTTCAAAACTACAGTTTTGCTGTAAGGGGTGTTGCAGATATTGTGGAAGTGCCTAACAACACACATTTGATGCTTGATGATGGAAGTAGAATGTTGGCACTTTCATCTGATCTTGAAAGAGTTTCAATAGTGGGCAACACTCGGTCAGAAGAATTATTAAATTTTGGCAGTCAAACAAAACCAGATGAAAGGAATTGTGTTGGAATAAATGAAACAGATAGATTTGAACATGATTTGGGGAATCTTCTTCGGTCACTGCATAAATCACATGAAAGCTCATCGCACACAAAAGCATCCCCTGCAGAAAAGATGCAAGTAAAAAATGTCTCCAAATATGTCTTAAGTGCTGCAAAAAACCCAGAATTTGCTCAAAAATTACACACTGTTCTATTAGAGAGTGGTGCTCTACCTCCGCCTGATCTCTTTTCACATCTAAATGCACAGGATACAGGTGAAGATAAGGTAATTGGAAATTTTCCTCAGGTTTGTGAAAAGATTGTTGAAAATTCTGTTCAGGCTGGTATTGATAGGTTGTTATCAAGCTATGAGAGGTCTGTTGAACCCCCTGAAGGGATGTGCTCTACCAGTGATAATACGGGGAAGGGGTCTGTGATTGTTTGTAATGGAGTTAAAGAATTGGAGCAAATTGATGGCTCAACTGTAGATAGTGCTATTGTGAATCCTCAACAGATGCACGAAGAGCAATTTATTGAGTCGTCCTTGCCCAAGGCAGCTATTTCATGCAAAAGACAAATTGGAGGGGCTTTTAATAACATTGAATTGGATAAAGATTCTGCTGTTCATTTAAATGAAACAGCTAATAGAGATCTTATTTTATATGATGGTAGTGAGAAAGTTAATGCAGTTCTAGGGGAGGGCATAGAATGGGAAATTCAATGGGAGGATCTTCATGTTGGTGAGCGTATTGGTATTGGTTCTTATGGTGAGGTTTACCATGCTGATTTGAAAGGCACTGAAGTTGCTGTGAAGAAGTTTCTAGACCAAGATTTCTCTGGTGATGCATTGGCTCAGTTTAAATCGGAAGTTGAGATCATGTTGAGGCTGCGGCATCCTAATGTTGTACTCTTCATGGGAGCAATTACTCGCCCCCCACATTTGTCTATCTTGACGGAGTTTCTTCCTAGAGGGAGTTTGTATAGGCTATTGCATCGTCCCAATTTTCAACTTGATGAGAAGAGGCGGTTGCGTATGGCTTTTGATGTGGCTAAGGGAATGAATTACTTGCACACAAGCCATCCTCCCATTGTCCATCGAGATTTAAAGTCTCCAAATCTTCTTGTCGACAAACATTGGGTTGTTAAGGTCTGTGATTTTGGCTTGTCGCGCATGAAGCACCATACTTTTTTGTCTTCAAAGTCTACTGCTGGAACACCTGAGTGGATGGCACCAGAAGTCTTAAGAAATGAACCAGCCAACGAGAAGTGTGATGTATATAGTTTTGGTGTGATTTTGTGGGAGTTGGCTACCACAAGGATCCCGTGGACAGGCTTGAATCCAATGCAGGTTGTTGGAGCTGTTGGATTTCAAAATAGACGGCTTGAAATTCCAGAAGACATTGATCCAGTAGTAGCACAAATAATACGTGACTGTTGGCAAACGGAGCCTCACTTGCGGCCATCATTCTCACAGATCATGTCTCGTCTTCGCCATCTTAAACGGTTTGTTGGAAGAACAAACTTGATACAGTAA 2733 0.4259 MPRMKHLLRKLHIGGGINDHQRLPETPPVLSPTPNLSLSSSTLPSPTMATVAANESVADRTAIDGTAGVGGDTGVDFSLMEEEFQMQLALAISASDPDVRKDPDSAQIDAAKQMSLGCEASVTDTEALVQFQSLRYWNYNVIDYEEKVMDGFYDVYGITSNLVERGKMPLLVDLQTTSISENLDCEVILVNRIVDLELKQLEQQACELSKDCYLFERGLILSGLLQKLADIVVNRMGGPVGDADEMLKRWTVRSCQLRNSLRTVVLPLGCLDIGLSRHRALLFKVLADRIDIPCMLVKGSYYTGTDDGAVNLIKADDGSEYIIDLMGAPGALIPAEVPSSQLQNYSFAVRGVADIVEVPNNTHLMLDDGSRMLALSSDLERVSIVGNTRSEELLNFGSQTKPDERNCVGINETDRFEHDLGNLLRSLHKSHESSSHTKASPAEKMQVKNVSKYVLSAAKNPEFAQKLHTVLLESGALPPPDLFSHLNAQDTGEDKVIGNFPQVCEKIVENSVQAGIDRLLSSYERSVEPPEGMCSTSDNTGKGSVIVCNGVKELEQIDGSTVDSAIVNPQQMHEEQFIESSLPKAAISCKRQIGGAFNNIELDKDSAVHLNETANRDLILYDGSEKVNAVLGEGIEWEIQWEDLHVGERIGIGSYGEVYHADLKGTEVAVKKFLDQDFSGDALAQFKSEVEIMLRLRHPNVVLFMGAITRPPHLSILTEFLPRGSLYRLLHRPNFQLDEKRRLRMAFDVAKGMNYLHTSHPPIVHRDLKSPNLLVDKHWVVKVCDFGLSRMKHHTFLSSKSTAGTPEWMAPEVLRNEPANEKCDVYSFGVILWELATTRIPWTGLNPMQVVGAVGFQNRRLEIPEDIDPVVAQIIRDCWQTEPHLRPSFSQIMSRLRHLKRFVGRTNLIQ 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1030 910 SMART serkin_6 644 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g1030 910 FunFam Serine/threonine-protein kinase CTR1 723 905 - -
Bisa09g1030 910 CDD STKc_MAP3K-like 650 896 - -
Bisa09g1030 910 PRINTS Tyrosine kinase catalytic domain signature 757 775 IPR001245 GO:0004672|GO:0006468
Bisa09g1030 910 PRINTS Tyrosine kinase catalytic domain signature 718 731 IPR001245 GO:0004672|GO:0006468
Bisa09g1030 910 PRINTS Tyrosine kinase catalytic domain signature 867 889 IPR001245 GO:0004672|GO:0006468
Bisa09g1030 910 PRINTS Tyrosine kinase catalytic domain signature 804 814 IPR001245 GO:0004672|GO:0006468
Bisa09g1030 910 PRINTS Tyrosine kinase catalytic domain signature 823 845 IPR001245 GO:0004672|GO:0006468
Bisa09g1030 910 ProSiteProfiles Protein kinase domain profile. 644 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g1030 910 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 115 899 - -
Bisa09g1030 910 FunFam Serine/threonine-protein kinase isoform 1 635 722 - -
Bisa09g1030 910 ProSitePatterns Serine/Threonine protein kinases active-site signature. 763 775 IPR008271 GO:0004672|GO:0006468
Bisa09g1030 910 Pfam Ethylene-responsive protein kinase Le-CTR1 130 333 - -
Bisa09g1030 910 Gene3D Transferase(Phosphotransferase) domain 1 723 904 - -
Bisa09g1030 910 Gene3D Phosphorylase Kinase; domain 1 637 721 - -
Bisa09g1030 910 ProSitePatterns Protein kinases ATP-binding region signature. 650 672 IPR017441 GO:0005524
Bisa09g1030 910 SUPERFAMILY Protein kinase-like (PK-like) 634 896 IPR011009 -
Bisa09g1030 910 Pfam Protein tyrosine and serine/threonine kinase 644 896 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1030 Bisa-ChrBisa09 15143589 15151875 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1030 1 900 MAP Kinase Kinase Kinase AT5G11850 58.198 0.0 992
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Bisa09g1030 PK_Tyr_Ser-Thr 6.2e-65 CL0016