Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1005 ATGGGGAGGGCTCCTTGCTGCGACAAAGCCAACGTGAAGAGAGGACCTTGGTCTCCTGAAGAAGACGCCAAGCTCAAGTCCTACATCGAACAGCATGGCACGGGTGGTAATTGGATCGCTTTGCCTCAAAAGATCGGGCTTAAGAGATGTGGGAAGAGTTGTCGTCTCAGATGGTCGGTAATAGCAGCCCAATTGCCCGGAAGAACAGATAATGATATAAAGAACTACTGGAACACGAGGCTGAAGAAGAAGTTTCTGGGTAAGCACCGTAAAGATCAGCGAGCACGGAGAGGCAGGAATGATAGTAGTGTTAGTGTCAAGCAGGAAATGAGTAATAACAAGAGTGGGAATACTATTGGAGATACATCGCTGTTTGTTCCACAGAGTAATTATCCTCAGCCTCAACTCTCATCTTGGCCACACGTGCTTGCAGCCTCACCACCCTTACTATACTCAGAACAAGACCACCAAGATTCCATTAGAAACTTGCTTATCAAGCTGGGAGGGAGATTTTCTGATGATTTTCTTCATCAATATGATGGCTTCAATTTTCAGTTCCCAGATGATCATAGTACTACAAATTCCACACAACCAGTTTATGAACTTCCTTTTGTTGCTTCTGTGAATAATAACCAAGTAGTTCAATGGGGTCAAAGCCAGTACTACTGTGGGGGACTTAACTTGGTGCAAGGAGGCAGTTTAATTGATCAGGAAATGTGGGCACCTAATGATTTAGCAGCACTGGATGAGCTGGAATTCTTGTATGGGGAACACATGAACATGATGAATGATAATAAGATCATAGGCCCTCCTACCCCTACCCCTACACCTACCAGATTCTGTGACCCCAACTCCATGGTTTATCATCCTCTTGTTGCTTCGAATCGTGAAAGTGTGCCACAGCAATTTCATATTCCGGAGTTGAGATATCCAGGAGCTCACTAG 945 0.4497 MGRAPCCDKANVKRGPWSPEEDAKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWSVIAAQLPGRTDNDIKNYWNTRLKKKFLGKHRKDQRARRGRNDSSVSVKQEMSNNKSGNTIGDTSLFVPQSNYPQPQLSSWPHVLAASPPLLYSEQDHQDSIRNLLIKLGGRFSDDFLHQYDGFNFQFPDDHSTTNSTQPVYELPFVASVNNNQVVQWGQSQYYCGGLNLVQGGSLIDQEMWAPNDLAALDELEFLYGEHMNMMNDNKIIGPPTPTPTPTRFCDPNSMVYHPLVASNRESVPQQFHIPELRYPGAH 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1005 314 ProSiteProfiles Myb-like domain profile. 9 81 IPR001005 -
Bisa09g1005 314 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 85 IPR017930 -
Bisa09g1005 314 Gene3D - 59 85 - -
Bisa09g1005 314 MobiDBLite consensus disorder prediction 87 123 - -
Bisa09g1005 314 PANTHER OS09G0431300 PROTEIN 57 128 - -
Bisa09g1005 314 SMART sant 13 83 IPR001005 -
Bisa09g1005 314 Pfam Myb-like DNA-binding domain 14 58 IPR001005 -
Bisa09g1005 314 SUPERFAMILY Homeodomain-like 14 82 IPR009057 -
Bisa09g1005 314 CDD SANT 16 81 IPR001005 -
Bisa09g1005 314 Gene3D - 7 58 - -
Bisa09g1005 314 FunFam Transcription factor RAX3 7 61 - -
Bisa09g1005 314 MobiDBLite consensus disorder prediction 104 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1005 Bisa-ChrBisa09 14707090 14708329 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1005 1 92 MYB Transcription Factor Family AT3G49690 66.935 2.39e-51 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa09g1005 Myb_DNA-binding 6.5e-12 CL0123