Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0993 ATGCAACATAAAAGTAAAGCCGAGCGGGGCGACAAAGGTGATTCCGCTAGTGATACGAAACGCAGCACTTTCTTCGATGTCTATGGCCCCGAAGGGAAGGCGGACATTGTTTTTAAAACACCGGAAGCTAATTCAACTTTGAATCTTAACGACATTCAAGGACTTGTAGCTTGGGTTCTTGGTGAAGGATTTATGCCGTCCTGGGTTTTTATTAAGAACAAACCTCTTATTCCAATGGTAGTTATGCTTTATATGCCAGGCCTGGATGCAGCTTTATACTTGTCACAGTCTAAATTGCTCCCCAGCTTAAAAAAATTCTGTGGCAATCCAAGAGCAGTATTAGCTCTTAGCTGTGTATCAGATGGAATGCAGACAATAGATGCACTTCTAACTTGCAAGCTCAAAAGAAAGAGGGAAGAAAGTAGTTCAGTTATGAAGAAATCTACCCTGATATCTCAGCAAGAAAAAAGTGATGGTGGCAACGATAATCTGTCTTTTATGGAGCTTACAAAGGACATACCTTTCCCTGTTTCATACTATACACTTACTGAGAAAGAACTAGAAGACAATGGATATTCATTTAATCAACCAGGTTTTCTTCCTACTATGCCTGCACCTTTGGGATCTTCTCCTTATGAAATGCTAGCACTTGACTGTGAGATGTGTATAACTAGTGAGGGTTTTGAGCTTACAAGAATTACCCTAGTGGATATCAAAGGACAGGTTGTGCTTGATAAATTTGTTAAACCATCAAATGCTATCATTGATTATAATACCAGGTTTAGTGGTATAACACCTGAGATGTTAAATGGGGTGACTACAAACCTGAAAGATATTCAGGAAGAGTTTCTAAAGCTGGTTTACAAAGAGACTATCTTAGTTGGGCATTCTTTGGAGAATGATTTATTAGCACTGAAGATCTCTCATGATTTGGTTATTGACACGGCAGTATTATACAAGCACCCCCGAGGTTCATCTCATAAAACTGCTCTACGGATTCTTGCTAAGAGATTTCTTTCTCGGGAAATACAGCAATCAGGGAATGGACATGACAGCATTGAAGATGCTGGAGCCACAATGGAATTGGCTCTACTGAAAATAATTCATGGACCTGACTTTGGTTCTCCCCCATCCTTCATGCGGAAAAAGCTCACTTCCATTTTGAGTGTGTCTGGCAAAGCTTCCTCTTTGATTGATGATATATCCATTGTAAAACGATATGTCTGTGAGTCCTCTCATGCAATTCCAGTGACTTCTGATGATGAAGCACTTGCAAGGACTGCCAAAGAGGTGAATAATAAAAAAGTACATTTTGTCTGGACACAGTTTACAGAATTATATTCATACTTAAAGAAGCAAGCTGAGGATTCAGAGATCTTGAATAGAAGACTTGCAGAGATGATGTCATTGCTTACTTGTCAGAAGAATTCTGCAAAAGGTAAAGACATCAAGCTGAGTGCTACTAATGAATTGAAGGAAATTCTAGCTCGCATGGATGCTAGAGTTCAAAATCTGTATGAGTCATTACCCTCTAATGCTATGTTGATAATTTGCACCGGTCATGGAGACACAGCAGTTGTACGCAGACTGAGGAGAATGCTTGCTGAGAAGAGTGAAGCTAATATAGGTCGTGAGAAGATTGTGGAAATCCTAGAAGAGGTCCAGGCTCGAGCTGAGGTAGCGTTGTGTTTTGTAGGTGTAAAGCATTGA 1710 0.4 MQHKSKAERGDKGDSASDTKRSTFFDVYGPEGKADIVFKTPEANSTLNLNDIQGLVAWVLGEGFMPSWVFIKNKPLIPMVVMLYMPGLDAALYLSQSKLLPSLKKFCGNPRAVLALSCVSDGMQTIDALLTCKLKRKREESSSVMKKSTLISQQEKSDGGNDNLSFMELTKDIPFPVSYYTLTEKELEDNGYSFNQPGFLPTMPAPLGSSPYEMLALDCEMCITSEGFELTRITLVDIKGQVVLDKFVKPSNAIIDYNTRFSGITPEMLNGVTTNLKDIQEEFLKLVYKETILVGHSLENDLLALKISHDLVIDTAVLYKHPRGSSHKTALRILAKRFLSREIQQSGNGHDSIEDAGATMELALLKIIHGPDFGSPPSFMRKKLTSILSVSGKASSLIDDISIVKRYVCESSHAIPVTSDDEALARTAKEVNNKKVHFVWTQFTELYSYLKKQAEDSEILNRRLAEMMSLLTCQKNSAKGKDIKLSATNELKEILARMDARVQNLYESLPSNAMLIICTGHGDTAVVRRLRRMLAEKSEANIGREKIVEILEEVQARAEVALCFVGVKH 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0993 569 CDD REX1_like 215 364 IPR034922 -
Bisa09g0993 569 SMART exoiiiendus 213 372 IPR013520 -
Bisa09g0993 569 FunFam RNA exonuclease NEF-sp 210 374 - -
Bisa09g0993 569 Gene3D - 211 370 IPR036397 GO:0003676
Bisa09g0993 569 SUPERFAMILY Ribonuclease H-like 214 367 IPR012337 -
Bisa09g0993 569 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 24 383 IPR047021 GO:0004527
Bisa09g0993 569 Pfam Exonuclease 216 362 IPR013520 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0993 214 362 C2H2 Transcription Factor Family AT3G27970 28.824 3.31e-08 53.9