Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0978 ATGGAGAAAAGGTGGGGATTAGGAGGGGGTGTTTGGAGAGGGAGGATGGGAAAGTGGTGTTTGGTTTGGGTTTTGATGGCGTTGGGTTATTGGTGTGTGGAATTAGGGGAAGCGTACCCATTTGAGGATTTGGTTGTGAGGTTGCCGGGCCAACCCAAGGTTGGGTTTAAGCAATACGCAGGGTACGTCGACGTCGACGTCAGTCACGGAAGGAGTCTCTTCTACTACTTCGTCGAGGCTCAGTCTGACCCCAATCATAAGCCTCTCACTCTTTGGCTCAATGGAGGACCGGGGTGTTCGTCGATAGGAGGAGGCGCGTTTACTGAATTGGGTCCGTTTTATCCCAGAGGCGACGGCCGTGGCATCCGAAGAAATTCAAAGTCTTGGAACAGAGTTTCTAATCTGCTGTTTGTGGAGTCTCCGGCTGGAGTTGGTTGGTCATATTCGAATACAACTTCAGATTATACTTGCGGAGATGAATCCACGGCCAATGATATGCATGTGTTCATGCTGAAATGGTTCGATAAGTTTCCTACGTTCAGATCGAGGAAGCTGTTCCTCACTGGAGAAAGCTATGCAGGACATTACATACCACAGTTGGCTAGTGTACTGTTGGACCACAACGCTCGTTCAACTGGTTTCAAATTCAATATCAAAGGAGTTGCTATTGGAAACCCACTTCTGAAACTTGACCATGATATTCCGGCAACATATGAATACTTCTGGTCCCACGGAATGATTTCCGATGAAATAGGGCTTGCCGTTATGAATGACTGCGATTTCCAGGACTATACTCTTCCGAGTCCTCACAACGTATCACACTCATGCAACCTTGCCATAGACGAAGCAAATCGCGTTGTGACCAATTACATAAACGATTATGATGTCATTCTGGACGTTTGTTATCCCTCCATTGTTGAGCAAGAACTCAGATTGAAAAAGATGGCTATTAAAATGAGTTACGGGGTTGATGTTTGCATGAGTTATGAAGACAACTTCTATTTAAACCTTCCCCAGGTTCAGAATGCTCTCCATGCAAACCGTACCAATCTACCTTATCCCTGGTCTATGTGTAGCGGGTTTTTAAATTATAGCGGCATCAATGGTAACATCAACATCCTTCCTATTCTCCAAAAGATAGTTCAGAATCACATCCCGGTTTGGGTTTTCAGTGGAGACCAAGATTCTGTGGTGCCGTTGCTGGGTTCGCGAACACTCATTCGAGAACTAGCTCGTGACATGAAGTTGAAGGTTACAGTTCCATATGGAGCTTGGTTCCACAAAGGCCAGGTTGGAGGTTGGGTAACAGAGTATGGAAATGTGTTGACATATGCAACGGTAAGAGGGGCAGCTCATATGGTGCCATATGCGCAGCCATCGAGGGCATTGAAGCTATTCACTTCATTTGTGAGTGGACGAAGGTTGCCTAATACAACACATCCTTCCATTGACGACTGA 1458 0.4616 MEKRWGLGGGVWRGRMGKWCLVWVLMALGYWCVELGEAYPFEDLVVRLPGQPKVGFKQYAGYVDVDVSHGRSLFYYFVEAQSDPNHKPLTLWLNGGPGCSSIGGGAFTELGPFYPRGDGRGIRRNSKSWNRVSNLLFVESPAGVGWSYSNTTSDYTCGDESTANDMHVFMLKWFDKFPTFRSRKLFLTGESYAGHYIPQLASVLLDHNARSTGFKFNIKGVAIGNPLLKLDHDIPATYEYFWSHGMISDEIGLAVMNDCDFQDYTLPSPHNVSHSCNLAIDEANRVVTNYINDYDVILDVCYPSIVEQELRLKKMAIKMSYGVDVCMSYEDNFYLNLPQVQNALHANRTNLPYPWSMCSGFLNYSGINGNINILPILQKIVQNHIPVWVFSGDQDSVVPLLGSRTLIRELARDMKLKVTVPYGAWFHKGQVGGWVTEYGNVLTYATVRGAAHMVPYAQPSRALKLFTSFVSGRRLPNTTHPSIDD 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0978 485 Pfam Serine carboxypeptidase 50 472 IPR001563 GO:0004185|GO:0006508
Bisa09g0978 485 SUPERFAMILY alpha/beta-Hydrolases 37 479 IPR029058 -
Bisa09g0978 485 FunFam Carboxypeptidase 40 303 - -
Bisa09g0978 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 137 IPR001563 GO:0004185|GO:0006508
Bisa09g0978 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 138 148 IPR001563 GO:0004185|GO:0006508
Bisa09g0978 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 173 198 IPR001563 GO:0004185|GO:0006508
Bisa09g0978 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 442 455 IPR001563 GO:0004185|GO:0006508
Bisa09g0978 485 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 46 459 IPR001563 GO:0004185|GO:0006508
Bisa09g0978 485 Gene3D - 373 472 - -
Bisa09g0978 485 FunFam Carboxypeptidase 373 472 - -
Bisa09g0978 485 ProSitePatterns Serine carboxypeptidases, serine active site. 187 194 IPR018202 GO:0004185
Bisa09g0978 485 Gene3D - 326 362 - -
Bisa09g0978 485 Gene3D alpha/beta hydrolase 41 302 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0978 Bisa-ChrBisa09 14279909 14285316 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0978 333 475 Calmodulin-binding Proteins AT2G22960 25.874 1.85e-10 58.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g0978 09 14279909 14285316 Bisa09g0978 09 14279909 14285316 ECH