Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0966 ATGCCCCCTCCTGTTCGCGCGGCACAAGACAATGCTCAACATTTAGCTTCTCAAGTCACTATCAAATGGGGTTCCTCTGCCTTCATTAGCATGTGCTGTGATGCTGTTGTTTCGGCAATCATAGCGACGACGCTGTTTGGGCTTCCACGCTTTAGCCCCTCTGTGTATTTTGAATCCCCGGGTGGTCATGTGGCAACCAAACGAACAGAGATGATAGGAAAGAAACTGGAGTTGTTGTTCATGTTCTCAACAGTCTTCACCATTGGAGCAACGTTCTTGTGTGTTGGAGCCGAACCACTGGAAGATAAGCAAGCCTTGCTTGACTTCCTTCGCAACATGAATCACTCTCGTCCTCTGAACTGGGATATGAACTCTTCTGTATGCAGTAGCTGGAGAGGAATCACCTGCAGTGGTGACCATTCCAGAGTTATAGCCCTTCATCTACCTGGAGCTGGGTTGAGCGGTCCAATCCCACCAAACACACTGAGTCGCCTCGCAGCTCTTCGGAGTTTGAGTCTTAGATCCAATACCATAACGGGTCCTTTTCCTTCTGCTCTATATGAGCTTAAAAGCTTAATCTACCTTTATCTTCAGTTTAACAAGTTTTCTGGTCCATTGCCATCAGATTTCTCAATCTGGAACAATCTCACTGTCGCTTATTTATCCAACAATTCTTTTAATGGCAGCATTCCTTCTTCTATTTCGAAGTTGACTCATCTCACATCTTTAGTCCTTGCCAACAACTCGCTTTCTGGTGAAATTCCTGATCTCAATATTCCTAGCCTGCAAGAGCTAAATTTAGCCAACAATAAGCTTACTGGGACTGTGCCCAAGTCCCTTCTGAGATTCGCAAGCTGGGGTTTTTCTGGGAACAACCTCACATCTGCAAATGCAGTTCCTCGAAATTCTCAACCAACAAAGAAAAAGAGACTTGGTGAGCCTGCATTACTGGGCGTCATTATTGGTGGTATTGCGGTGGTATTTTTGGTGATTGCAGCTTTGGTGCTTGTGTGCTACTATGACAAGGAAGGAGAAAATGGGGTCCTAGTGAAGTCCCAGAGAAAAAAAGTGCCCATGAAAAAAGATGTTTCTGAGAGTCAGGACAGGAAAAACAAGATTGTGTTCTTTGAAGATTGCAATCTTGCGTTTGACCTGGAAGATCTGTTGAGAGCATCAGCTGAGGTGCTTGGGAAGGGAAGCTATGGCACCACATATAAAGCTGCCCTAGAGGATGCAACCACTGTGGTGGTAAAAAGATTGAAGGAGGTCACCATAGGTAAACGCGAGTTTGAACAGCAGATGGAGATCGTGGGAAGGATTAGGCACGAAAATGTGGCTGCTCTAAGGGCTTACTACTATTCCAAGGAGGAGAAACTGATGGTGTATGACTACTATGAACAGAGTAGCGTTTCTACTATTTTGCATGGTAGGAGAGGGGAAGGAAGGACATATTTGGACTGGGAAAGCAGGCTGAGAATTGCAATAGGTGCAGCAAGAGGCATTGCTCATATCCATTCTCAACAAGGAGGGAAACTCATTCATGGAAACATAAAGGCCTCAAACATCTTCCTCAACTCCCAAGGATATGGTTGTGTTTCTGATATGGGTTTAACAATACTGATGAGTCCAGCACTCCCACCAGCATTTAGAAGTGGAGGGTACCGTGCCCCGGAAGTAACAGACGCTCGAAAAGCAAGCCACGCCTCCGATGTCTATAGCTTCGGGGTGTTACTGCTTGAGCTTCTGACGGGAAAATCTTCCATACATGCCACAGGAAGAAGTGAAGAAGTTGTTCACTTGGTTAGGTGGGTGAATTCTGTGGTCAGGGAAGAGTGGACAGCAGAGGTTTTTGATGTGCAATTACTGAGATATCCAAATATAGAGGAAGAAATGGTGGAGATGTTACAACTGGGGATGGCATGCGTGGGGAGGATACCTGAGCAGAGGCCAAAAATGGAAGAGGTCTTGAGAATGGTGGAGGAAATTAATCGAGAAAATTCTGGGAATCGTCCATCGACTGAATCCAGATCAGGAGTTTCTACTTCCACTCCTACCCCACAAGCACTTGACACACCTTCTTCCCCTGTTCCAGAGGAATCTTCTTGTCGTGGTGATTGTGGGGCTACAAGGAGGATCTCTCTCAGTTTTCTCTTCGGTTTCACCATGGCATCGAAGCGGATCTTGAAGGAACTCAAGGATTTACAGAAGGATCCTCCTACATCTTGCAGCGCCGGTCCCGTTGCTGAAGACATGTTTCATTGGCAAGCAACAATTATGGGTCCTCCTGACAGTCCTTATGCAGGAGGTGTTTTCCTGGTTACAATCCATTTTCCTCCAGATTATCCCTTTAAGCCACCCAAGGTTGCATTCAGGACGAAGGTATTCCACCCAAATATAAATAGCAATGGAAGCATTTGCCTTGACATATTGAAGGAGCAATGGAGCCCTGCTCTAACTATTTCCAAGGTGTTGCTATCTATTTGTTCCCTGTTGACGGACCCAAATCCTGATGATCCTTTGGTCCCTGAAATTGCCCACATGTACAAGACAGACAAGAACAAATATGAGTCAACGGCTAGAAGTTGGACCCAGAAATATGCCATGGGCTAA 2610 0.4579 MPPPVRAAQDNAQHLASQVTIKWGSSAFISMCCDAVVSAIIATTLFGLPRFSPSVYFESPGGHVATKRTEMIGKKLELLFMFSTVFTIGATFLCVGAEPLEDKQALLDFLRNMNHSRPLNWDMNSSVCSSWRGITCSGDHSRVIALHLPGAGLSGPIPPNTLSRLAALRSLSLRSNTITGPFPSALYELKSLIYLYLQFNKFSGPLPSDFSIWNNLTVAYLSNNSFNGSIPSSISKLTHLTSLVLANNSLSGEIPDLNIPSLQELNLANNKLTGTVPKSLLRFASWGFSGNNLTSANAVPRNSQPTKKKRLGEPALLGVIIGGIAVVFLVIAALVLVCYYDKEGENGVLVKSQRKKVPMKKDVSESQDRKNKIVFFEDCNLAFDLEDLLRASAEVLGKGSYGTTYKAALEDATTVVVKRLKEVTIGKREFEQQMEIVGRIRHENVAALRAYYYSKEEKLMVYDYYEQSSVSTILHGRRGEGRTYLDWESRLRIAIGAARGIAHIHSQQGGKLIHGNIKASNIFLNSQGYGCVSDMGLTILMSPALPPAFRSGGYRAPEVTDARKASHASDVYSFGVLLLELLTGKSSIHATGRSEEVVHLVRWVNSVVREEWTAEVFDVQLLRYPNIEEEMVEMLQLGMACVGRIPEQRPKMEEVLRMVEEINRENSGNRPSTESRSGVSTSTPTPQALDTPSSPVPEESSCRGDCGATRRISLSFLFGFTMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARSWTQKYAMG 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0966 869 ProSitePatterns Protein kinases ATP-binding region signature. 396 427 IPR017441 GO:0005524
Bisa09g0966 869 MobiDBLite consensus disorder prediction 662 704 - -
Bisa09g0966 869 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 722 868 IPR000608 -
Bisa09g0966 869 Pfam Leucine rich repeat N-terminal domain 101 137 IPR013210 -
Bisa09g0966 869 SMART ubc_7 725 868 - -
Bisa09g0966 869 Gene3D Ribonuclease Inhibitor 101 211 IPR032675 -
Bisa09g0966 869 Pfam Protein kinase domain 393 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g0966 869 PANTHER OS05G0588300 PROTEIN 85 673 - -
Bisa09g0966 869 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 795 810 IPR023313 -
Bisa09g0966 869 ProSiteProfiles Protein kinase domain profile. 390 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g0966 869 Gene3D Phosphorylase Kinase; domain 1 355 464 - -
Bisa09g0966 869 Gene3D Transferase(Phosphotransferase) domain 1 466 682 - -
Bisa09g0966 869 FunFam pollen receptor-like kinase 1 359 464 - -
Bisa09g0966 869 Pfam Ubiquitin-conjugating enzyme 726 862 IPR000608 -
Bisa09g0966 869 CDD UBCc 724 863 IPR000608 -
Bisa09g0966 869 SUPERFAMILY UBC-like 717 868 IPR016135 -
Bisa09g0966 869 MobiDBLite consensus disorder prediction 665 698 - -
Bisa09g0966 869 FunFam Ubiquitin-conjugating enzyme 28, E2 722 869 - -
Bisa09g0966 869 Gene3D Ribonuclease Inhibitor 212 307 IPR032675 -
Bisa09g0966 869 SUPERFAMILY L domain-like 113 285 - -
Bisa09g0966 869 SUPERFAMILY Protein kinase-like (PK-like) 394 660 IPR011009 -
Bisa09g0966 869 FunFam Probable inactive receptor kinase RLK902 100 258 - -
Bisa09g0966 869 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 465 673 - -
Bisa09g0966 869 Gene3D Ubiquitin Conjugating Enzyme 719 869 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0966 Bisa-ChrBisa09 14138685 14151894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0966 97 685 Receptor kinase-like Gene Family AT4G23740 57.492 0.0 675
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bisa09g0966 Pkinase 1.7e-31 CL0016