Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0965 ATGGAACAGAGCATCCTATGCAAATACACCGTGCATCACAGCGTTACCAAGAAGCTCGCGAAGCCGGCGACAACCACCAAGAAGGCCTCCCATCTCCAGAATCCGCTTGAGCCCCGAGTGGTTCGGATATCGGTGACCGATCCAGATGCCACGGACTCTTCCAGCGACGAGGAAGGAGAGTTTCTCGGTCGTCCTAGAGTGAAGCGGTATGTGAACCAGATTGACATCGAAACCGGCGTCAAAAACGTCACCCTTCCCAACAATGCCCGGAAGCGGCCCGCCGGAGAGACCACCTCGTGCCGGCGGCCTGTCAAGGTTTCCACAACCAACAACGGCAGGAAGTTCCGAGGCGTACGGCAGAGACCCTGGGGGAAATGGGCGGCGGAGATTCGAGATCCCGCCAGGCGCGTACGGCTCTGGCTGGGTACGTACGACACAGCAGAGGAAGCGGCCATGGTGTACGACAATGCGGCGATTAAGCTGCGAGGCCCTGACGCTTTAACTAACTTCGTGACGCCACCGGCAAGGGAAAAGGCAGAGGCAGAGGAAGGCGAAGAAACAGAAGGAGAAAAGCGGGAAATGAAAGTGTCCGTCAAGTCAGAAGCCTCCGGTTCGGGGTACGACTCCGGGGACGAGTTACACAATCTGTCATCTCCCACATCGGTGCTTCAATTCAGAAGCAATTCGAGCGAGGAAGGGGAACCAAAGAAGGCGATGGAAGCGGAGGAAGCGCGGGAGTGTGAGGGAGAGGGAGAGGAGGAAGAAGGGGTTGGAAGGGAAGAGGTATTAGGGGAGTACGAAGGGGAAACGAGCCTGTGGGAGGAGAATTGGAGGGCGGATATGCCAGTGTGGGATGAGGGTCTATTGAATTTCCCAACGGCGGAGGAGTCATCGGCGTTGTTCGAAGAACCGTGGGAGATGTTTGGGGAAACGACGACGATTTTGGCAGGGAGTGGGGGGATTGTAACAGAGAGTGAGGTGGATTGGGAGAGAATGTACTCGCCATCGAGCACGTGCCAAGTGGACGATTTCTTCCAAGACATATTGTTAGGGTCAGATCCTCTGGTGGTGCTCTGA 1077 0.5645 MEQSILCKYTVHHSVTKKLAKPATTTKKASHLQNPLEPRVVRISVTDPDATDSSSDEEGEFLGRPRVKRYVNQIDIETGVKNVTLPNNARKRPAGETTSCRRPVKVSTTNNGRKFRGVRQRPWGKWAAEIRDPARRVRLWLGTYDTAEEAAMVYDNAAIKLRGPDALTNFVTPPAREKAEAEEGEETEGEKREMKVSVKSEASGSGYDSGDELHNLSSPTSVLQFRSNSSEEGEPKKAMEAEEARECEGEGEEEEGVGREEVLGEYEGETSLWEENWRADMPVWDEGLLNFPTAEESSALFEEPWEMFGETTTILAGSGGIVTESEVDWERMYSPSSTCQVDDFFQDILLGSDPLVVL 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0965 358 MobiDBLite consensus disorder prediction 18 62 - -
Bisa09g0965 358 FunFam Ethylene-responsive transcription factor 2 113 172 - -
Bisa09g0965 358 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 38 254 - -
Bisa09g0965 358 MobiDBLite consensus disorder prediction 210 229 - -
Bisa09g0965 358 MobiDBLite consensus disorder prediction 230 244 - -
Bisa09g0965 358 PRINTS Ethylene responsive element binding protein signature 115 126 IPR001471 GO:0003700|GO:0006355
Bisa09g0965 358 PRINTS Ethylene responsive element binding protein signature 137 153 IPR001471 GO:0003700|GO:0006355
Bisa09g0965 358 CDD AP2 114 170 IPR001471 GO:0003700|GO:0006355
Bisa09g0965 358 Gene3D AP2/ERF domain 113 172 IPR036955 GO:0003700|GO:0006355
Bisa09g0965 358 MobiDBLite consensus disorder prediction 170 268 - -
Bisa09g0965 358 MobiDBLite consensus disorder prediction 86 109 - -
Bisa09g0965 358 Pfam AP2 domain 114 163 IPR001471 GO:0003700|GO:0006355
Bisa09g0965 358 SUPERFAMILY DNA-binding domain 114 171 IPR016177 GO:0003677
Bisa09g0965 358 MobiDBLite consensus disorder prediction 245 260 - -
Bisa09g0965 358 SMART rav1_2 114 177 IPR001471 GO:0003700|GO:0006355
Bisa09g0965 358 ProSiteProfiles AP2/ERF domain profile. 114 171 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0965 Bisa-ChrBisa09 14097269 14098345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0965 7 232 AP2-EREBP Transcription Factor Family AT4G27950 48.052 8.26e-56 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa09g0965 AP2 7e-14 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g0965 09 14097269 14098345 Bisa09g0965 09 14097269 14098345 ECH