Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0958 ATGTGTCTGAACGCACCTTCCACCTTTCCAGAAACCCATGAGATGTTGATCCAGAGGATCACAGTCGCTATTGAAAAGGCCCTGGCAATGCTACACTGGACTGGTGAATCAGTTACAGTGGGTGAACAATCAAAACACCCCACAGAACTTATGTCTGCTGACTCATCTTTTAACCCTTGCAGTGAAGAATCTGATAGGGATCTCCGGGACCATGACCACAATGCCCCCAGAAAGAGAGGGTATTATAGATGCACGCATAGAAATGTGCAAGGTTGTTTGGCGACAAAGCAAATGCAACGATCAGACGAAGACCCAATCATTTTTGAGATAACTTACAGGGGAAGCCACACCTGCACACTCGCCTCCAACCTCCCTCATTCATCAATGGATCCTCCGCAGCAGCAGGGCCATGCAGATCCCCCACTCCAACCATCACTTGCATCTTTCCAATTTCCTTCCAGTTTCAACGTGAAACCTGAAACCCAGGAATTGTGTCCTATGGTCGAAAACAATTCTGTTGAAGCCTTTATTTCTCCTTCCTATTTGTTCCCAACCACATCTGCAACAGCCCACTTTTCAGTGTCTTATCAAAATCTGGGGGCTTCTGCTTCTGACATCGATCACATCAATATCCCACCTGCAAACACTTCCAGCGTTGGATTGGAGTTCCCTTTTGATCAGTTCTAA 687 0.4658 MCLNAPSTFPETHEMLIQRITVAIEKALAMLHWTGESVTVGEQSKHPTELMSADSSFNPCSEESDRDLRDHDHNAPRKRGYYRCTHRNVQGCLATKQMQRSDEDPIIFEITYRGSHTCTLASNLPHSSMDPPQQQGHADPPLQPSLASFQFPSSFNVKPETQELCPMVENNSVEAFISPSYLFPTTSATAHFSVSYQNLGASASDIDHINIPPANTSSVGLEFPFDQF 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0958 228 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 76 162 IPR044810 GO:0003700
Bisa09g0958 228 Pfam WRKY DNA -binding domain 74 118 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa09g0958 228 ProSiteProfiles WRKY domain profile. 76 121 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa09g0958 228 Gene3D WRKY domain 66 121 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa09g0958 228 MobiDBLite consensus disorder prediction 42 59 - -
Bisa09g0958 228 MobiDBLite consensus disorder prediction 122 143 - -
Bisa09g0958 228 SMART WRKY_cls 71 120 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa09g0958 228 MobiDBLite consensus disorder prediction 42 74 - -
Bisa09g0958 228 MobiDBLite consensus disorder prediction 60 74 - -
Bisa09g0958 228 SUPERFAMILY WRKY DNA-binding domain 74 120 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0958 Bisa-ChrBisa09 13994588 13995583 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0958 11 139 WRKY Transcription Factor Family AT5G24110 33.742 9.75e-19 81.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bisa09g0958 WRKY 9.5e-14 CL0274