Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0942 ATGAATATTCACATCCTCTTCTTCCTCCTCTCCTTTCTTCCTCCAGCAATCACAGAAACATGCTTGGACGCCGTTTGCCTGAACAACAACTTGGTAATCCGATTCCCGTTCCAGATACAGAGGCAGCAGCCAAAATCATGTGGTTATCCTGGTTTTACTGTATCCTGCAACAAAGACGGCCATACACTATTAAAACTCCCTTATTCCGAAGGAGAATTCAGTATCCAAGCAATCAACTATGCCACACAGGAACTATGGGTCAATGATCCCACAAACTGCCTACCAAAACGCATACTCTCACTAAACCTCTCTGGATCTCCATTCAGTGCAGTTTACTATCAAGATTTTGCGTTGTTCAACTGTTCCTTGGAGTATCTTAAATATCGGTATAACCCTATATCTTGTCTCAGTGATACAAACTACACAGTATTTGCTACTTCTTCGAGAACGGTGCTCGTGCACCTATCGGCCGTTTGTAATTTTATTAGGACAGTTACGGTGCCAGTTCAATGGCCGTTTTACGATCAGATATCGACGTCTGACCTTAGCGATGATCTCCGCCTCTCGTGGGACTCGCCGCCGTGTGGGAGGTGCGAGTCGCGCGGAGGACGGTGTGGTTTCAACGGCAATTCCACTTTTGAGATTTCCTGTTCCCATTTTCCTTCACAAGGGATTTCAATGGGCGAACGTTATGCTATAAGCATAGGCACAGGGGTAGCAGCTGTGCTGTGCTTCGTTGGCATGTTGTGTTTCATTTGTGGGTGGTGCAGAAGCCCTGAGACTGTGGCAGATTTCAACTCGCTTGTTGGGCCGCAACCACAACCCACCATGGTTTCGGGCCTGGACAGGCCCACGATCGAGTCGTACCCGAAGATAGTAGTGGGTGAGAGTCGTGGGCTGCCAAAGCCCGATGACAAGACATGCCCAATATGCTTGAGCGAGTACGGCCCAAATGACACACTGAAGACAATACCTCCATGCCACCATTGTTTCCATGCTGATTGCATCGATGCATGGCTTCCTTTGAATGCTTCCTGTCCACTATGCCGGACTTCCCCCGGAAAATTACCGTCCACGGAGGATCCACCTCCGACTTGA 1098 0.4863 MNIHILFFLLSFLPPAITETCLDAVCLNNNLVIRFPFQIQRQQPKSCGYPGFTVSCNKDGHTLLKLPYSEGEFSIQAINYATQELWVNDPTNCLPKRILSLNLSGSPFSAVYYQDFALFNCSLEYLKYRYNPISCLSDTNYTVFATSSRTVLVHLSAVCNFIRTVTVPVQWPFYDQISTSDLSDDLRLSWDSPPCGRCESRGGRCGFNGNSTFEISCSHFPSQGISMGERYAISIGTGVAAVLCFVGMLCFICGWCRSPETVADFNSLVGPQPQPTMVSGLDRPTIESYPKIVVGESRGLPKPDDKTCPICLSEYGPNDTLKTIPPCHHCFHADCIDAWLPLNASCPLCRTSPGKLPSTEDPPPT 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0942 365 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 5 353 IPR046948 -
Bisa09g0942 365 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 272 354 IPR013083 -
Bisa09g0942 365 ProSiteProfiles Zinc finger RING-type profile. 308 350 IPR001841 -
Bisa09g0942 365 Pfam Wall-associated receptor kinase C-terminal 154 217 IPR032872 -
Bisa09g0942 365 SUPERFAMILY RING/U-box 301 356 - -
Bisa09g0942 365 Pfam Wall-associated receptor kinase galacturonan-binding 21 89 IPR025287 GO:0030247
Bisa09g0942 365 Pfam Ring finger domain 307 350 IPR001841 -
Bisa09g0942 365 SMART ring_2 308 349 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0942 Bisa-ChrBisa09 13563881 13566150 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0942 19 354 C3H Transcription Factor Family AT2G46495 37.318 1.50e-72 228