Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0931 ATGGAGTTCGGAAGGATCGGATCCTCCGACCCGGGAGGCTCATCCAGGCGCTCCGATGCTCCCATAATTTCTAAACCAAAATCCTCCGCATTATCCGACGCCGCCTCCAATAAGAAGAAGCTCATCTTATTGTCGGTTCTCGCCGTCGTTTTGATCGTCGCCTCCGCCATCTCCGCCGTGATTGTGATCGGCGGGCGGAATCGGGCTTCTGGTCAGAATGGGCCTAATATCCGGGGGAAGCCCACCCAGGCAATCTCTCAGGCCTGCAGCAAAACCCAATTCCCCCAACTGTGTGTGAGCTCGCTCCTCGAGTTCCCGGGCTCAACCACCGCGTCCGAGGAAGAGCTCGTCCACATTTCCTTTAACATGACTCTGCAGCACCTGAGCAAAGCTCTGTACTCCTCCACCGGGATCTCCTACGTCGAGATGGATCCACTTGTACGGTCGGCGTACGAGGACTGCCTGGAGCTCCTGGAGGACTCCATGGACGCCCTCGAGCGCTCCCTCACCTCCATCGCGCCGTCGCCGGATGGCAGCGGCTCCACCGATGACGTGATGACGTGGCTGAGCGCCGCCCTCACAAATCAGGACACGTGTACGGAGGGATTCGCGGAAATGAGCGGGGCCGTGAAGGATCAGATGGCGAATAATTTGAAGGACTTGTCAGAACTGGTGAGCAATTGCCTGGCGATCTTTGCGGCGAGTGGCAGTGGCGACTTCTCGGGAGTGCCGATACAGAACAGGAGAAGATTGATGGGCGTGAATAATGGCGAGATTTCGGGGAATTTCCCAAAATGGTTGAGCAGACGAGATAGGAGATTGCTGAGTTTGCCTGTATCGGCGATGCAAGCAGATGTAATCGTGTCCAAGGATGGGAATGGAACGCACCAGACAATCGCAGAGGCCATTAAGAAGGCGCCTGAGCACAGTAGCCGCCGCTTCATTATCTACGTAAGGGCAGGAAGGTATGAAGAGAAAAATTTAAAGGTGGGAAGGAAGAAGACGAATTTGATGTTCATAGGGGACGGGAGGGGTAAGACAATCATCACAGGCAAAAGAAATGTCATGGATGGGTTGACGACATTCCACACAGCATCCTTCGCTACAACCGGCGCGGGCTTCATCGCACGAGACATTACGTTCGAGAACTACGCCGGTCCGAGCAAGCACCAAGCGGTGGCCCTCCGTGTCGGAGCCGACCACGCGGTGGTTTACGGTTGCGACATCCTGGGATACCAAGACACGTGTTATGTCCACTCCAACCGTCAGTTCTTCCGCGAATGTAACATCTACGGAACTGTGGACTTCATTTTTGGTAACGCAGCAGTAGTTTTCCAAAACTGCAGTCTTTACGCTCGCAGGCCCATGGCCCAACAAAAGAACACTATCACGGCCCAAAACCGAAAAGACCCGAATCAGAATACGGGTATATCAATCCACAATTGTCGGATCCTACCTGGCCCAGATCTGGAGCCAGTAAAAGGAAGCGTATCCACCTATCTTGGCCGTCCATGGAAAATGTACTCTAGAACTGTGTACTTGTTGTCATACATGGGTGATCACATCCATCCAAGTGGATGGCTGGAGTGGAATGGTCAATTTGCTTTGAAGACTCTGTACTATGGTGAGTACATGAATTATGGGCCCGGTGCAGCTATAGGAGAACGGGTGGATTGGCCCGGGTATCGGGTCATCACGTCCACGATGGAGGCACGGCGGTTCACGGTGGCCGAATTCATATCGGGTTCCTCATGGTTGCCATCAACGGGAGTGGCATTTTTGGCTGGGCTAGCCACTTGA 1800 0.54 MEFGRIGSSDPGGSSRRSDAPIISKPKSSALSDAASNKKKLILLSVLAVVLIVASAISAVIVIGGRNRASGQNGPNIRGKPTQAISQACSKTQFPQLCVSSLLEFPGSTTASEEELVHISFNMTLQHLSKALYSSTGISYVEMDPLVRSAYEDCLELLEDSMDALERSLTSIAPSPDGSGSTDDVMTWLSAALTNQDTCTEGFAEMSGAVKDQMANNLKDLSELVSNCLAIFAASGSGDFSGVPIQNRRRLMGVNNGEISGNFPKWLSRRDRRLLSLPVSAMQADVIVSKDGNGTHQTIAEAIKKAPEHSSRRFIIYVRAGRYEEKNLKVGRKKTNLMFIGDGRGKTIITGKRNVMDGLTTFHTASFATTGAGFIARDITFENYAGPSKHQAVALRVGADHAVVYGCDILGYQDTCYVHSNRQFFRECNIYGTVDFIFGNAAVVFQNCSLYARRPMAQQKNTITAQNRKDPNQNTGISIHNCRILPGPDLEPVKGSVSTYLGRPWKMYSRTVYLLSYMGDHIHPSGWLEWNGQFALKTLYYGEYMNYGPGAAIGERVDWPGYRVITSTMEARRFTVAEFISGSSWLPSTGVAFLAGLAT 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0931 599 Gene3D - 279 597 IPR012334 -
Bisa09g0931 599 PANTHER PECTINESTERASE 52 587 - -
Bisa09g0931 599 NCBIfam pectinesterase inhibitor domain 78 232 IPR006501 GO:0004857
Bisa09g0931 599 MobiDBLite consensus disorder prediction 1 27 - -
Bisa09g0931 599 Coils Coil 148 168 - -
Bisa09g0931 599 CDD PMEI-like_3 88 234 - -
Bisa09g0931 599 ProSitePatterns Pectinesterase signature 2. 430 439 IPR033131 -
Bisa09g0931 599 Gene3D Invertase/pectin methylesterase inhibitor family protein 82 234 IPR035513 -
Bisa09g0931 599 FunFam Pectinesterase 81 235 - -
Bisa09g0931 599 Pfam Pectinesterase 285 582 IPR000070 GO:0030599|GO:0042545
Bisa09g0931 599 SMART PMEI_2 80 231 IPR006501 GO:0004857
Bisa09g0931 599 Pfam Plant invertase/pectin methylesterase inhibitor 84 231 IPR006501 GO:0004857
Bisa09g0931 599 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 83 232 IPR035513 -
Bisa09g0931 599 FunFam Pectinesterase 279 597 - -
Bisa09g0931 599 SUPERFAMILY Pectin lyase-like 280 596 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0931 Bisa-ChrBisa09 13369643 13372848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0931 1 598 Carbohydrate Esterase AT5G53370 64.060 0.0 800